Gene Mjls_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3042 
Symbol 
ID4878755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3177057 
End bp3178649 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content72% 
IMG OID640140342 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001071312 
Protein GI126435621 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.261396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.193129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGG CTAGCGCCGA CGCGGTCGTC ATCGGCGCCG GGCACAACGG TCTGGTCGCC 
GCGGCGCTGA TGGCCGACGC CGGCTGGGAT GTCGTCGTGC TCGAGGCGCA GCCAGAACCC
GGAGGGGCCG TGCGGAGCGC CGAGCGCATC CCGGGCTACA CCAGCGATCT CTACAGCGCG
TTCTATCCGC TGTCGGTCGC GTCGCCGGTG CTGGCGGGCC TGCACCTGGA AGACCACGGT
CTGCGGTGGA CGCACGCGCC TGCCGTCGTC GGACACCCAC GCTCGGCCGC CGACGAGGAC
GCGCCGGTCA TCTACCGCGA CATCGCCCGC ACCGCCGAGG AACTCGCGCG CCACCACCCG
GCCGACGGGG ACAACTGGAT GCGGTTGTTC GACCTCTGGC AGCAGGTCAG GGATCCGCTG
CTGAGCAGCC TCTTCTCACC GTTTCCCCCG GTACGCGGGG CGGCCGGGCT GCTGCGCACG
CTGGGAGCCG CCGAGGCGCT GCGCCTGGTG CACCGGCTAG TGCTGCCGGT CGGTGAGATG
GCCCGGCAAA TGTTCGCCGG CGACGCCGCC CGGCTGCTGT TGCTCGGCAA CGCCCTGCAC
GCCGACGTGC CTGTCGACGC GCCCGGCAGC GGCGTGATGG GCTTCATGCT GATCATGATG
GCGCAGGACG GGGGATGGCC GGTCCCCGTC GGCGGCGCCG GACAACTCAC CGCCGCCCTG
GTCGACCGGG CCCGATCCGC CGGGGCGCAG ATCCACTGCG GACAGCAGGT CACCGGCATC
GAGGTGCGCG GCGGCCGGGC CGTCGGCGTG CGCACCGCGG ACGGCCGAAC GGTCGCCGCG
CGGCGCGCGG TGGTGGCCGA CGTGTCCGCG CCCGCGCTGT ACCGCGAGCT GCTGCCGTCG
ACGGCCGTAC CACCTCGAGT TCTCGAGGAT TTCGAGCACT TCACCTGGGA CACGCCGGTC
CTGAAGGTCA ACTACGCGCT GGACGCGCCG ATCCCGTGGC GGTCGAAGAA CCTCAACGAG
GTCGGCACGG TGCACCTCGG CGCCGACGCC GACGGGCTGG TCCGGTGGAT GGCCGACCTC
AACACCCGCA CGGTCCCCGA GCATCCCTTC ATGCTGTTCG GCCAGATGAC CACCGCCGAT
CCGACGCGGT CACCGGAAGG CACCGAAAGC GCCTGGGCTT ACACGCATCT GCCGCGCGAC
GTCACCGACG ACGCCTCGGC GGACCAATTG TCCGAGGCGG TCGACCGGGT GCTCGAGGAG
CACGCGCCCG GATTCACCGA TCAGGTCGTC GGGAAGTTCA TCCAGCGTCC CTCGGAGCTG
ACGGCTTCCG ACGCGAACCT CGTGGGCGGC GCCGTCAACG GCGGTACCGC CCAGTTGCAG
CAGCAGCTCA TCTTCCGCCC GACCCCGGGG TTCGGCCGTG CCGAGACGCC GATCGAAGGG
CTGTTCCTCG GCAGCGCGGG AGCCCACCCC GGCGGCGGGG TGCACGGTGT CTGCGGACGC
AACGCCGCCA CGGCGGCGCT CGCGAGCGAC GGGCTGACCG GCTGGCCGCG GCGAAAGATC
AATCAGCTGG TGATGTCGCT GTTCGTCCGT TAG
 
Protein sequence
MTPASADAVV IGAGHNGLVA AALMADAGWD VVVLEAQPEP GGAVRSAERI PGYTSDLYSA 
FYPLSVASPV LAGLHLEDHG LRWTHAPAVV GHPRSAADED APVIYRDIAR TAEELARHHP
ADGDNWMRLF DLWQQVRDPL LSSLFSPFPP VRGAAGLLRT LGAAEALRLV HRLVLPVGEM
ARQMFAGDAA RLLLLGNALH ADVPVDAPGS GVMGFMLIMM AQDGGWPVPV GGAGQLTAAL
VDRARSAGAQ IHCGQQVTGI EVRGGRAVGV RTADGRTVAA RRAVVADVSA PALYRELLPS
TAVPPRVLED FEHFTWDTPV LKVNYALDAP IPWRSKNLNE VGTVHLGADA DGLVRWMADL
NTRTVPEHPF MLFGQMTTAD PTRSPEGTES AWAYTHLPRD VTDDASADQL SEAVDRVLEE
HAPGFTDQVV GKFIQRPSEL TASDANLVGG AVNGGTAQLQ QQLIFRPTPG FGRAETPIEG
LFLGSAGAHP GGGVHGVCGR NAATAALASD GLTGWPRRKI NQLVMSLFVR