Gene Mjls_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2966 
Symbol 
ID4878679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3090411 
End bp3091220 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID640140261 
Producthemolysin A 
Protein accessionYP_001071236 
Protein GI126435545 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.173623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGGC GCGCACGGGT CGACGCCGAG TTGGTGCGAC GGGGGTTGGC CCGGTCGCGT 
CAGCAGGCCG CCGAGCTCAT CGGCGCAGGC CGGGTGACCG TCGACGGTAT GCCGGCGGCC
AAACCGGCGA CCGCGGTCGC CGTCACCGCC CATATCGCCG TCGACACCGC GGACGAACGG
TCCTGGGTGT CGCGGGGCGC GCACAAACTC ATCGGCGCCC TCGACGCCTT CGACATCGAC
GTCGCGGATC GGCGCGGACT CGATGCCGGG GCGTCGACCG GGGGTTTCAC CGAGGTCCTG
CTCGACCGCG GCGCCCGCGA AGTCGTCGCC GTCGACGTCG GATACGGCCA ACTGGCGTGG
TCGCTGCGCT CGGATGAGCG GGTGGTGGTC GTCGAACGCA CCAACGTGCG CGAACTCACC
CCGGAGATGA TCGGCGGTCC TGTCGACCTC GTCGTGGCGG ACCTGTCGTT TATCTCCCTG
GCGACGGTTC TGCCCGCGCT GACCGCATGC GCGTCGCCCG ACGCCGATAT CGTTCCCATG
GTGAAGCCGC AGTTCGAGGT CGGGAAGGAC CGGGTCGGCG CCGGTGGCGT CGTCTCGGAA
CCCGAATTGC GTGCGGAGTC GGTGCTGTCC GTGGCCGCCA AGGCCGCCGG GCTCGGCTGG
GAGACGGTCG GTGCGACGGC GAGCCCGCTG CCGGGCCCGT CGGGCAACGT CGAGTACTTC
TTGTGGTTAC GCGCCCGCAC GGACCGCGGA CTGCGCGGCG ACGATCTCGA GCAGGCGGTG
CGGCGCGCCG TCACGGAAGG ACCGCAATGA
 
Protein sequence
MTRRARVDAE LVRRGLARSR QQAAELIGAG RVTVDGMPAA KPATAVAVTA HIAVDTADER 
SWVSRGAHKL IGALDAFDID VADRRGLDAG ASTGGFTEVL LDRGAREVVA VDVGYGQLAW
SLRSDERVVV VERTNVRELT PEMIGGPVDL VVADLSFISL ATVLPALTAC ASPDADIVPM
VKPQFEVGKD RVGAGGVVSE PELRAESVLS VAAKAAGLGW ETVGATASPL PGPSGNVEYF
LWLRARTDRG LRGDDLEQAV RRAVTEGPQ