| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2957 |
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| Symbol | xerD |
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| ID | 4878670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | - |
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| Start bp | 3081022 |
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| End bp | 3081978 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640140252 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001071227 |
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| Protein GI | 126435536 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.271721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.636956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCCT CAGCTGTTCG ACGGTCGGCG CTCGACGATC AGCTGCAGGG CTACCTCGAC
CATCTGACCA TCGAACGCGG CGTCGCCGCG AACACGCTGA GCTCTTACCG CCGCGATCTG
CGGCGCTATT CGGAGCACCT CACCGGCCGC GGGGTCGAGG ACCTCGCGAA GGTCACCGAA
TCCGATGTCA GCGACTTCCT GGTCGCCCTG CGGCGCGGTG ATCCCGACAC GGGGGCCCAG
GCGCTGTCGG CGGTCTCGGC GGCGCGGGCG CTGATCGCGG TGCGAGGTCT GCACCGCTTC
GCGACCGCCG AGGGGTTGAC CGATGTCGAC GTGGCCCGCG CGGTCAAACC GCCCACCCCC
GGGCGCCGGT TGCCCAAGAG CCTGTCGATC GACGAAGTTC TCGCACTCCT CGACGGCGCC
GGAGGTGACA GCGAGGCCGA CGGCCCCCTC ACACTGCGCA ACCGCGCACT GCTCGAACTG
CTGTACTCGA CCGGCGCGCG GATCTCCGAA GCGGTCGGCC TCGACATCGA CGACGTCGAC
ACCCATGCGC GCTCTGTGCT GCTGCGCGGT AAGGGCGGGA AGCAACGGCT GGTGCCGATC
GGCAGGCCTG CGGTGAGCGC GCTGGACGCC TACCTGGTCC GGGGGCGGCC GGATCTGGCC
CGCCGCGGCC GCGGTACGCC GGCGATCTTC CTCAACGCGC GCGGGGGCCG GCTGTCGCGC
CAGAGCGCGT GGCAGGTGCT GCAGGACGCC GCCGACCGGG CCGGGATCAC CTCCGCGGTG
TCGCCGCACA CGTTGCGGCA CTCCTTCGCG ACCCATCTGC TCGACGGCGG CGCCGATGTG
CGCGTCGTCC AGGAACTGCT CGGGCACGCC TCGGTGACCA CGACGCAGAT CTACACCATG
GTGACGGTGC ATGCGCTGCG CGAGGTGTGG GCGGGGGCGC ATCCGCGGGC CCGGTGA
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| Protein sequence | MAPSAVRRSA LDDQLQGYLD HLTIERGVAA NTLSSYRRDL RRYSEHLTGR GVEDLAKVTE
SDVSDFLVAL RRGDPDTGAQ ALSAVSAARA LIAVRGLHRF ATAEGLTDVD VARAVKPPTP
GRRLPKSLSI DEVLALLDGA GGDSEADGPL TLRNRALLEL LYSTGARISE AVGLDIDDVD
THARSVLLRG KGGKQRLVPI GRPAVSALDA YLVRGRPDLA RRGRGTPAIF LNARGGRLSR
QSAWQVLQDA ADRAGITSAV SPHTLRHSFA THLLDGGADV RVVQELLGHA SVTTTQIYTM
VTVHALREVW AGAHPRAR
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