| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2898 |
|---|
| Symbol | |
|---|
| ID | 4878611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 3025618 |
|---|
| End bp | 3026817 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640140192 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001071168 |
|---|
| Protein GI | 126435477 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.681989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCG GAGTGCTCGA CGTGACCGCG GTGCGCGCCC GCCGTGCCCG GGTCGCGGTG
GCCGCGCAGT TCCTCACCAA CGGGGCGTTG TTCGCGAACC TGCTGCCGCG CTTTCCGGAG
ATCAAGACCG ATCTGGCGCT GTCGAATGCC GTGTACGGGC TCACGATTGC CGCGTTCTCC
GCGGGGGCGT TCGTCGCCGG CCTCACCGCA GCCGCCCTGA TCCGCCGCTT CAGTTCGGCG
CGCGTCGCGG TCGGGGGAAC CATCGCCATC GCGGTCTTCG TCTTCGCGGC CGGGCTCGCG
CCGTCGGCGG TGCTGGTGGC CTGTGCGCTG TTCCTGGCGG GCGCGTCCGA CGCGGTCACC
GATGTGGCGC AGAACGCGCA TGCCCTTCGG GTCCAGCGCA TCTACGGCCG ATCCATCATC
AACTCGGTGC ACGCCGTGTG GGCCGGCGGC GCGGTCCTCG GCGGCCTCAT GGGCGCGGCG
GCGATCGCCC TGCACATCCC GCGGCCGGTG CACCTCGGGG TGGCCGCCGT CGTGTTCACC
GGTGTGGTGC TGGTCGCCTA CCGCTTCATG CTGCCGGGCG CCGACCAGGA CGACCATCCG
GCGTCCGGGT ATGCCGAGGG CGAGCGCGCC GGCCGGAGGG TGTACCTCGT GCTGGTCGCG
CTGGCCGTCA TCGCCATCGC AGGGGCGATG GTCGAGGACG CCGGAAGTTC GTGGGCCACC
TTGTATCTGC GCGACAGTGT CGGCGCACCG GGGGCGATCG CGGCGTTCGG GTACATCGCC
CTCGCGGCGT TCATGTTCGT CGGCCGGCTC ATCGGCGACC GGCTGGTCGA CCGGTTCGGC
GAAACCGCGG TGGCCCGGGC CGGGGGAGCG CTGGCCGCGG CCGGGATGGG TGTGGCGCTG
GCCTTCCCGA GCGTTCCCGC GACGATCGCC GGCTTCGCCG CCGCCGGACT CGGCGTGGCC
ACCGCGATCC CGGCGGCCAT GCACGGCGCC GATCAGCTTC CGGGACTGCG ACCGGGGACC
GGTCTGACCA TCGTCACGTG GCTGCTGCGG ATCGGCTTCC TGGCCTCACC GCCACTCGTC
GGCCTGATCG CCGACTGGAC CAGTCTGCGG ATCGGACTGC TGACCGTGCC GGTTGCCGGG
CTGGTGATCA TGGTGCTCGC GGGTGCGCTC AATGTGAGAG GCCGGCCAGT TCGATCGTGA
|
|---|
| Protein sequence | MASGVLDVTA VRARRARVAV AAQFLTNGAL FANLLPRFPE IKTDLALSNA VYGLTIAAFS
AGAFVAGLTA AALIRRFSSA RVAVGGTIAI AVFVFAAGLA PSAVLVACAL FLAGASDAVT
DVAQNAHALR VQRIYGRSII NSVHAVWAGG AVLGGLMGAA AIALHIPRPV HLGVAAVVFT
GVVLVAYRFM LPGADQDDHP ASGYAEGERA GRRVYLVLVA LAVIAIAGAM VEDAGSSWAT
LYLRDSVGAP GAIAAFGYIA LAAFMFVGRL IGDRLVDRFG ETAVARAGGA LAAAGMGVAL
AFPSVPATIA GFAAAGLGVA TAIPAAMHGA DQLPGLRPGT GLTIVTWLLR IGFLASPPLV
GLIADWTSLR IGLLTVPVAG LVIMVLAGAL NVRGRPVRS
|
|---|
| |