| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2612 |
|---|
| Symbol | |
|---|
| ID | 4878328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2738342 |
|---|
| End bp | 2739394 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640139909 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_001070885 |
|---|
| Protein GI | 126435194 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC ACCGTATCGC CGTCATCCCC GGCGACGGGA TCGGCACGGA GGTGACGGCC
TCGGCGCGCA CCGTGCTCGA CGCGGTCGCC GCGCGCCACG GGATCGACCT GTCCTATGAG
GAATTCGACT GGTCCTGCCG ACGGTTCGAG CGCGACGGGG CGATGATGCC GGCCGATGGG
TTGGAGACCC TGAGTGGCTT CGACGCGATC CTGCTCGGCG CGGTCGGCTG GCCGGGCGTG
CCCGACCACG TCTCGCTGTG GGGTCTGCTC ATCCCGATCC GGCGGGCATT CCGTCAGTAC
GTGAACCTGC GGCCCATCCG GGTGTTCGAC GGGGTCGCCA GCCCGCTGCG CGACGCCACC
GACGTCGACT TCGTGGTCGT CCGGGAGAAC GTCGAGGGTG AGTACAGCGA GATCGGCGGA
CGGATCAACC GGGGTTTCCC CGACGAGATG GCGGTGCAGG AGTCGGTGTT CACCAGGGTC
GGCGTCACCC GCATCGCCGA CTACGCGTTC GACCTCGCCG AAACCCGGCG CCGGTATGTC
ACCTCGGCGA CGAAATCCAA CGGCATCGTC CACACCCTGC CGTTCTGGGA CGAAGTGGTC
GCCGAGCGTG CCGCCAACCA TCCGGGCGTG CGGTTCGACA GCGAGCACAT CGACGCGCTG
GCCGCGAAGT TCGTGCTGCA GCCGGGACGG TTCGACGTGG TGGTCGGCTC GAACCTGTTC
GGCGACATCC TGTCCGACCT CGCGGCGGCC GTGGCGGGGT CGATCGGGAT CGCCCCGTCG
GCGAATCTCG ACCCCACCAA GCAAAACCCG TCGATGTTCG AACCCGTGCA CGGATCGGCG
CCCGACATCG CCGGGCGGGG GGTGGCGAAT CCGATCGGCG CGGTGTGGTC GGCGGCGTTG
ATGCTCGAAC ACCTCGGGCA CGCGTCGGCC GCGGCCGACG TGATGACCGC CGTCGAACGC
ACACTGGCGC AACCGCAGAC GCGCACCGCC GACCTCGGCG GGCACGCGTC GACCGCCGAG
GTCACCGACG CGCTGGCCGC CCAGTTGCGC TGA
|
|---|
| Protein sequence | MSAHRIAVIP GDGIGTEVTA SARTVLDAVA ARHGIDLSYE EFDWSCRRFE RDGAMMPADG
LETLSGFDAI LLGAVGWPGV PDHVSLWGLL IPIRRAFRQY VNLRPIRVFD GVASPLRDAT
DVDFVVVREN VEGEYSEIGG RINRGFPDEM AVQESVFTRV GVTRIADYAF DLAETRRRYV
TSATKSNGIV HTLPFWDEVV AERAANHPGV RFDSEHIDAL AAKFVLQPGR FDVVVGSNLF
GDILSDLAAA VAGSIGIAPS ANLDPTKQNP SMFEPVHGSA PDIAGRGVAN PIGAVWSAAL
MLEHLGHASA AADVMTAVER TLAQPQTRTA DLGGHASTAE VTDALAAQLR
|
|---|
| |