Gene Mjls_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2604 
Symbol 
ID4878320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2730487 
End bp2731362 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID640139901 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001070877 
Protein GI126435186 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0914889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTG TAGCCAGCAG TAGCCGGCAG CGCAGCAGGA TCGCTCCCTA TCTGATGATC 
CTGCCCGCGC TGGCTTATCT CGCAATCTTT TTCGTGTGGC CGCTGATCTC GCTGGCGCGC
ACGTCGCTGT CGTCGACCAG CGGGTCGGTG TTCCTGCCGA CCCTCACCTT CTCGTGGGAT
TTCGCCAATT ACAGTGAGGC GTTCAGCAGG TACTCCGACC AGATCATGCG GTCGTTCGGC
TATGCGCTGA CCGCGACGAT CGTGTGTCTG CTGCTGGCCT ATCCGCTCGC CTACGTCATC
GCGTTCAAGG CCGGCCGGTT CAAGAACCTG ATCCTCGGCC TGGTCATCCT GCCGTTCTTC
GTGACGTTCC TGATCCGCAC GATCGCATGG AAAACCATTC TGGCCGACGA CGGTTTGGTG
GTGAGCGCGC TGGGCGCGAT CGGGTTGCTG CCCAGCGACG GCCGCCTGCT GTCCACCAGC
TGGGCGGTCA TCGGCGGGCT GATCTACAAC TGGATCATCT TCATGATCCT GCCGCTGTAC
GTCAGCCTCG AGAAGATCGA CCCGCGGCTC ATCGAGGCGT CGAGGGATCT GTACTCGTCG
AACACCCGCA GCTTTGCGAA GGTGATCCTG CCGCTGTCGC TGCCCGGTGT GCTGGCGGGC
AGCCTGCTGG TGTTCATCCC CGCGGCCGGC GACTTCATCA ACGCCGAATA CCTCGGCAGT
ACGCAGACCA CGATGATAGG CAACGTGATC CAACAGCAGT TCCTCGTCGT CAAGGACTAT
CCGGCGGCCG CGGCGCTGAG CCTGGTTTTG ATGGGCACGA TCCTGGCCGG TGTGCTGCTC
TACACGCGGG CGCTGGGCAC GGAGGACCTG GTATGA
 
Protein sequence
MAGVASSSRQ RSRIAPYLMI LPALAYLAIF FVWPLISLAR TSLSSTSGSV FLPTLTFSWD 
FANYSEAFSR YSDQIMRSFG YALTATIVCL LLAYPLAYVI AFKAGRFKNL ILGLVILPFF
VTFLIRTIAW KTILADDGLV VSALGAIGLL PSDGRLLSTS WAVIGGLIYN WIIFMILPLY
VSLEKIDPRL IEASRDLYSS NTRSFAKVIL PLSLPGVLAG SLLVFIPAAG DFINAEYLGS
TQTTMIGNVI QQQFLVVKDY PAAAALSLVL MGTILAGVLL YTRALGTEDL V