Gene Mjls_2603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2603 
Symbol 
ID4878319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2729633 
End bp2730490 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID640139900 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001070876 
Protein GI126435185 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0922779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC AAGCCGGCGC CGCGGTCGCC GCCGCGGCCG AGCAGCCGCC CCGACCGAAA 
ACCGTTCGGG GAACTCCGAA GTGGGGTGAC TGGAGCCTGC GGATCGTCGC CGGCCTGGTG
CTGCTGTACC TGTTCATCCC GATCTTCGTG ATCGTGCTGT TCTCGTTCAA CGACCCCAAG
GGGAAGTTCA ACTACAGCTG GCAGGGCTTC ACGCTCGACA ACTGGCTCGA CCCGTTCAAG
TACCCGGCGC TGACGAACGC GATGAAGTTG AGCCTCAACG TCGCCGGGGT GTCGACGCTC
ATCGCGCTGG TACTCGGCAC GCTCGTGGCC ATCGCGCTGG TACGTCAGCG CTGGCGCGGA
CAGCGTGCTG TCGACACGTT CCTGGTGCTT CCGCTCACCG CGCCCGAGGT GGTGATGGGC
GCATCGCTGC TGGTGCTGTT CCTCGACCTG GGCTGGGCGA CCGGATACGT CACGATCGTG
TTGGCCCACA TCGCCTTCGA GGTCAGCTTC ATCGCGATGA CGGTGCGCGC CCGGGTGCGG
GGCTTCGACT GGACACTCGA GGATGCGTCG ATGGATCTGG GCGCGAGTCC GACCCGGACG
TTCTTCAAGG TGACGCTGCC GTTGATCGTC CCCGGCATCG TCGCCGCGGC GATGCTCTCG
TTCGCGCTGT CGCTCGACGA CTTCATCATC ACCTATTTCG TCAGCGGGTC CACTGTGACG
TATCCGCTCT ACGTCAACGC GGCGGTCAAG GCCGCGGTGC CACCGCAGAT CAACGTGATC
GCGACGGCGA TCCTCGTGGT CAGCCTGATC CTGTTGGCGG CGGGCACGCT CTACCGCCGC
AAGCGCATCG ACGTCTAG
 
Protein sequence
MTTQAGAAVA AAAEQPPRPK TVRGTPKWGD WSLRIVAGLV LLYLFIPIFV IVLFSFNDPK 
GKFNYSWQGF TLDNWLDPFK YPALTNAMKL SLNVAGVSTL IALVLGTLVA IALVRQRWRG
QRAVDTFLVL PLTAPEVVMG ASLLVLFLDL GWATGYVTIV LAHIAFEVSF IAMTVRARVR
GFDWTLEDAS MDLGASPTRT FFKVTLPLIV PGIVAAAMLS FALSLDDFII TYFVSGSTVT
YPLYVNAAVK AAVPPQINVI ATAILVVSLI LLAAGTLYRR KRIDV