Gene Mjls_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2544 
Symbol 
ID4878262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2666468 
End bp2667709 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID640139843 
Producttranscriptional regulator, CadC 
Protein accessionYP_001070819 
Protein GI126435128 
COG category[K] Transcription
[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCCGT CACCGCCCGA GTCCGTTCCG GCCACCACCG GTGGCACGGG ACACCGCGGC 
GTCTGGCGGT TCGGCGAGTT CGTCCTCGAC ACCGCGCGGT ACGAATTGCG TTGCGGCCAC
AACGTCGTCA AGGTCGAGCC GCAGGTGTTC GACGTATTGA CCCACCTCGT CGCCAACCAC
GACCGGTTCG TCAGCAAAGA AGAGTTGTTC GACACCGTGT GGGGTGGGCG GTTCGTCGGA
GAGGCCGCGC TGACCAGCCG GATCAAGGCC GCCCGTCGGG CGCTCGGCGA CGACGGCGAG
TCGCAGCGCT ACATCCGCAC GGTGCGCGGC CGCGGCTATC AATTCGTCGC GACTATCGCG
GCGGACGAAC CCGCGCAGGC TCCGGCGCCC GAGGTGCCGG CGCCGCGTCA GCACATCGCG
TTCTGCCGCG CCGCCGACGG GGTCCGGTTG GCGTACGCGG TCTCCGGCGA AGGGCCACCG
CTGGTCCGGG CCGCCAACTG GATGACCCAC CTCGGCTACG ACATTGAGAG CCCGGTGTGG
CGGCACTGGG TGCGCGACCT GTCGCGTGGC CACACCCTCA TCCGGTACGA CGAACGCGGC
TGCGGGCTTT CCGACTGGGA GGTCGGCGAT TTCACCTTCG ACGCCTGGGT GGCCGATCTG
GAATCCGTCG TCGAAGCGCT CGGGCTCGAG CGCTTCCCGC TCATGGGAGT GTCCCAGGGC
GGGGCGGTGG CGGTGGCCTA CGCCGCCCGC CACCCGGACC GGGTCAGCCG GCTGGTGCTC
TGCGGCGCCT ATGCGAAAGG CCGCGCGGTG CGCGCCGCCA ACGAGGAGGA GAAGCGGGCG
GCCTCACTGG ATCTCGACCT CGCCCGGGTC GGTTGGGGTC GTGACGATCC TGCGTTCCGG
CAGGTGTTCG CCGCGCAGTT CCTGCCCGAC GGGACCCGCG CAGACTGGTC CGCGTTCGAT
CAGCTGCAGC GCCGGACCAC ATCCCCGGAC AACGCGGTGC GGTTCCTCAC CGAATTCGGC
CGCATCGACG TCTGCGAGGA GGCCCAGTAC GTGCGCTGCC CGACGCTGGT CCTGCACTCG
CGCGACGATC ACCGGGTGCC GCAACGCTTC GGCGAGGAGC TGGCGGCGTT GATCCCTGCC
GCGCGGTTGG TGACGCTGAA CAGCAACAAC CACCTGCTGA CGGGCACCGA ACCGGCATGG
CGGGTGTTCT GCACCGAGGT GGGCGCCTTC CTGGCCGGCT GA
 
Protein sequence
MAPSPPESVP ATTGGTGHRG VWRFGEFVLD TARYELRCGH NVVKVEPQVF DVLTHLVANH 
DRFVSKEELF DTVWGGRFVG EAALTSRIKA ARRALGDDGE SQRYIRTVRG RGYQFVATIA
ADEPAQAPAP EVPAPRQHIA FCRAADGVRL AYAVSGEGPP LVRAANWMTH LGYDIESPVW
RHWVRDLSRG HTLIRYDERG CGLSDWEVGD FTFDAWVADL ESVVEALGLE RFPLMGVSQG
GAVAVAYAAR HPDRVSRLVL CGAYAKGRAV RAANEEEKRA ASLDLDLARV GWGRDDPAFR
QVFAAQFLPD GTRADWSAFD QLQRRTTSPD NAVRFLTEFG RIDVCEEAQY VRCPTLVLHS
RDDHRVPQRF GEELAALIPA ARLVTLNSNN HLLTGTEPAW RVFCTEVGAF LAG