Gene Mjls_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2530 
Symbol 
ID4878248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2650926 
End bp2652101 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content68% 
IMG OID640139829 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_001070805 
Protein GI126435114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.232541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC AGTACGGTGC GACGGTGACC GATCCGTCCG GGGTGCGCAT CGAACTCGAC 
CACGTGTCCA AGGTCTATCC GGGTGCCACC GAACCCGCGG TCGACGACGC GTCGCTGGAC
ATCCCGGCCG GTGAGATCGT CGTCTTCGTC GGCCCGTCCG GGTGCGGCAA GACGACGATG
ATGCGAATGA TCAACCGGCT CTCCGAGCCG ACATCGGGCC GGATCCGCAT CGGCGACGTG
GACGCGCTGT CGATCAAACC GACGGAACTG CGGCGCAAGA TCGGTTACTC CATCCAGCAG
GCGGGTCTGT TCCCGCACAT GACGATCCGC CAGAACGTCG GACTGGTGCC CGGGCTGTTG
CGCTGGGACC GCAAACGCAT CGCGTCGCGG GTCGACGAAC TGCTCGATCT GGTCGGACTC
GATCCGGGGC AGTACGCCGA CCGGTATCCG CGCCAGTTGT CCGGCGGTCA GCAGCAGCGC
GTCGGTGTCG CCCGGGCGCT GGCCGCCGAC CCTCCGGTGC TGTTGATGGA CGAACCGTTC
GGCGCCGTCG ACCCGATCAC CCGCAGCACT CTGCAGGACG AATTGCTGCG CCTGCAAACC
GAATTGCGCA AGACCATCGT GTTCGTCACC CACGACTTCG GCGAGGCGGT CAAACTCGGC
GACCGGATCG CGGTGCTCGG GCCGCGGTCG AAGCTGCTGC AGTACGACAC CCCGCAGAAC
ATCCTCGCCA ACCCTGCCGA CGAGACGGTG GCCGGATTCG TCGGGTCCGG CGCCTCGCTG
CGCCAACTGG GGTTGATGCG GGTCAAGGAC ATCGAGTTGC GTCAGCACCT CGCGGTCCAC
GCCGAGGACC CGGTCGAGCA GGTGCGCGAC CAGTTGGCGG CCGGCGACGC CGACTGGGCG
GTCATTCTCG ACCAGCGGGA CCGCCCGGTG AAGTGGGTGC GCGAGAACCG GCTGCGGCAC
GCCGCGTCGC TCTCGGAGGC CGCCGAGGAC CTCGACGTCG TCAGCACACA CTCCACCCTG
GAGGACGCCC TCGAAGCCAT CCTCGCCGAA CAGCACGCGT CCGCGGTGGT CACCGGTGCC
GGCGGCCGAT ACGCCGGTCT GGTCACCCTC GAGATGCTCA TCGACACCAT CACCCGGCTG
CGCGCGGAGG CCAACGCGGA GAACCCGGAA CCGTGA
 
Protein sequence
MTTQYGATVT DPSGVRIELD HVSKVYPGAT EPAVDDASLD IPAGEIVVFV GPSGCGKTTM 
MRMINRLSEP TSGRIRIGDV DALSIKPTEL RRKIGYSIQQ AGLFPHMTIR QNVGLVPGLL
RWDRKRIASR VDELLDLVGL DPGQYADRYP RQLSGGQQQR VGVARALAAD PPVLLMDEPF
GAVDPITRST LQDELLRLQT ELRKTIVFVT HDFGEAVKLG DRIAVLGPRS KLLQYDTPQN
ILANPADETV AGFVGSGASL RQLGLMRVKD IELRQHLAVH AEDPVEQVRD QLAAGDADWA
VILDQRDRPV KWVRENRLRH AASLSEAAED LDVVSTHSTL EDALEAILAE QHASAVVTGA
GGRYAGLVTL EMLIDTITRL RAEANAENPE P