Gene Mjls_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2332 
Symbol 
ID4878052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2435578 
End bp2437344 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content71% 
IMG OID640139633 
Productthiamine pyrophosphate binding domain-containing protein 
Protein accessionYP_001070609 
Protein GI126434918 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.428788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0160517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCAA CAAGCGACCA CCTGCGATGT GTGGTCGGGG CTTGGAGGTG GCACATGACT 
GTCAGCGGCG GCGATCTACT CGCCCGGGCG TTGGCGGATG CGGGCGTCAC GGAGGTGTTC
ACCCTGCACG GTGGCCACCT GGACGCCTTC CTGGTGGCGT GCGGCAAACA CGATGTCCGG
CTCACCGATA CGCGGCACGA GTCCAGCGCA GGCCACGCGG CGGACGCCTA CGCGCGCGTG
ACCGGGAGTC TGGGGGTGTG CGTGGTGACC TCGGGTCCGG GCTTCACCAA CGCCTACACC
GCGATCGCCA ACGCCTACCT CGACCGCACC CCCACGCTGT TCATCGTGGG CGGGCCCCCG
TTGCGGGAGA GCGAGACCAA CCCGCTGCAG GGCGGCTTCG ATCAGGTGGC CGCGGCGGCG
CCGGTGACCA AGTGGGCGTA CCGGCTCACC GAAGCCGCCC GCATTCCCGA GATCGTGTCC
CTGGCCGTGC GTAAGGCGAC CACCGGCGCA CCGGGTCCGG TCCTGCTGGA GGTGCCCATC
GACGTGATGT TCGGCGAGGC GGACGAAACC GAGGTGAGGT ACCCGGCGCG CTACGCCCTC
GACGCGCGTT CGGTGCCGTC GGATTCCGTT GTCCACCAAG CGCTCGACGT GCTCCAGGGC
GCCCAGCACC CGGTCATCGT CATCGGTGGT GGTGTCACCT TCTCGCGCGC GGCCGACGCG
CTGGTCGCCT TCGCCGAGAC GGTCGGCGTT CCGGTGTTCT ACCCCGGCAA GTCCGACGGC
GCCATCCCCG CCAGTCACCG ACTCGCCGCG GGCGGACTGC TCGGGCTGGG CGCCCTGTCC
GCGCTGGGCG CCCCGACCCC CGATGTGGTG CTGCTCGTCG GCGCCCGCGC CGGCATGTTC
ACCGGAGGGC GCGCGAGCAT GTTCCCCGGC GCCCGCATCG TGCAGGTCGA CCTGGACGCG
GCCGAGATCG GCCGCATGCA GGATGTCGCC GTCGCGATAG TGGCCGACTG CCGGGAGACG
CTGCGGGCGT TGCAGGCCGC GGCGGCGGAC CGCGACTGGC CGGACTGGTC GGAGTGGGTT
CACACCGCGG TGCAGGCGCA GCGGTTCCAC CGCGCCCTCT ACCCCGACGC TGCGACGCCC
AGCGGTCGGA TGCATCCGTA CTTCGCCGCC CGCGCCGTCG TCGAGGCATG CCCTCCGGGA
ACGACCTTCG TGCTCGACGG CGCCGAGGCG CCGGCCTGGG CGGAGTTCTT CGCGACCACC
GAGACGGTCG GTGGTGTGCT GCGCCTGGGC TATCTCGGAA CCCTCGGCGT CGGGCCGGGT
TTCGCGATCG GTGCCGCACG GGCCCGGCCG GCGGCCCCGG TGGTGCTCAT CACCGGCGAC
GGTGCCGCCG GCTTCCACCT CGGCGAATTC GACACCATGG CCCGCCACGG TATGCCGGTG
TTGACGGTCG TCTTCAACAA CGCGGTGTGG GGCATGTCGG TGCACGGCCA GCAGGCCGTC
TACGGGGACG GCGGTGTCGT GGTGTCCGAA TTGGCCGACA GCTCATACGA AAAGGTCGCC
GAGGCGTTCG GCGGCTACGG TGAGCGCGTC GGCGAGGTCG ACGAGATCGC CGCCGCGGTC
CAGCGCGCAT TCGCCGCGCA GGTTCCCGCC TGTCTCAACC TCGAGATCGA TCCGCACACC
GTGCATCCAC TGACCACGAT GATGCTCGGC GACGTGACCG CCACCGACGC GATCGTCGTG
CCCTACTACG AGAACCTGCC CCGCTGA
 
Protein sequence
MVPTSDHLRC VVGAWRWHMT VSGGDLLARA LADAGVTEVF TLHGGHLDAF LVACGKHDVR 
LTDTRHESSA GHAADAYARV TGSLGVCVVT SGPGFTNAYT AIANAYLDRT PTLFIVGGPP
LRESETNPLQ GGFDQVAAAA PVTKWAYRLT EAARIPEIVS LAVRKATTGA PGPVLLEVPI
DVMFGEADET EVRYPARYAL DARSVPSDSV VHQALDVLQG AQHPVIVIGG GVTFSRAADA
LVAFAETVGV PVFYPGKSDG AIPASHRLAA GGLLGLGALS ALGAPTPDVV LLVGARAGMF
TGGRASMFPG ARIVQVDLDA AEIGRMQDVA VAIVADCRET LRALQAAAAD RDWPDWSEWV
HTAVQAQRFH RALYPDAATP SGRMHPYFAA RAVVEACPPG TTFVLDGAEA PAWAEFFATT
ETVGGVLRLG YLGTLGVGPG FAIGAARARP AAPVVLITGD GAAGFHLGEF DTMARHGMPV
LTVVFNNAVW GMSVHGQQAV YGDGGVVVSE LADSSYEKVA EAFGGYGERV GEVDEIAAAV
QRAFAAQVPA CLNLEIDPHT VHPLTTMMLG DVTATDAIVV PYYENLPR