Gene Mjls_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2330 
Symbol 
ID4878050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2433708 
End bp2434973 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content65% 
IMG OID640139631 
Productextracellular ligand-binding receptor 
Protein accessionYP_001070607 
Protein GI126434916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.26288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0264278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAC CAGGACGCTC CTCGTTCCAC AGATCGGCTC TTGCTGCGGG AAGTCTGGTC 
ACCGTGACCA GCATGTTGCT GGCGGGCTGC GGCAGCAAGG CCAGCGACAC CGACGCCGCC
AGCGCCGAGT CCTGTGTCGA CACCTCCGGC CCGAACATCA AGGTGGGCTC GCTGAACTCG
CTGTCCGGCA CGATGGCGAT CTCGGAGGTC ACCGTCCGCG ACGCCATCAA GCTGGCGGTC
GACGAGATCA ACGGCGCCGG CGGGGTGATG GGCAAGCAGA TCCAGCTCAT CGGCGAGGAC
GGCGCCTCCG AGCCGACGGT GTTCGCGGAG AAGGCCGAGA AGCTGATCAG CAGCGACTGC
GTCGCCGCAG TGTTCGGCGG CTGGACCTCG TCGAGCCGCA AGGCCATGCT TCCGGTGTTC
GAGAGCGCCA ACTCGCTGCT GTACTACCCG GTGCAGTACG AGGGCCTCGA GTCGTCGAAG
AACATCTTCT ACACCGGCGC CACCACCAAC CAGCAGATCG TTCCCGCACT GGACTACCTC
AAGGAGAAGG GCGTCAAATC GCTGTACCTG GTGGGCAGCG ACTACGTCTT CCCGCAGACC
GCCAACCGCA TCATCAAGGC CTACGCCGAG GCCAACGGCA TCGCGATCAA GGGTGAGGAC
TACACCCCGC TGGGTTCGAC GGACTTCTCG ACGATCGTCA ACAAGGTCCG CACCGCCGAC
GCCGACGCGG TGTTCAACAC GCTCAACGGC GACTCCAACG TCGCGTTCTT CCGCGAGTAC
AAGAACGTCG GCCTGACCCC GCAGGCGATG CCGGTGGTGT CGGTGTCGAT CGCCGAGGAA
GAGGTCGGCG GCATCGGCGT GCAGAACATC ACCGGTCAGC TGACGGCCTG GAACTACTAC
CAGACCATCG ACACCCCGGT GAACAAGGCG TTCGTGGAGG CCTACAAGAA GGCCTATGGC
GCGAACAAGC CCACCTCCGA TCCGATGGAG GCCGCCTACG TGTCGGTGTA CCTGTGGAAG
AACACCGTCG AGAAGGCACA GTCGTTCGAC GTCAAGGCGA TCCAGGACAA CGCGGGCGGG
GTCACGTTCG ACGCACCCGA GGGCAAGGTC ACGATCGACG GCGAGAACCA CCACATCACC
AAGACCGCCC GCATCGGTGA GATCCGCCCG GACGGCCTGA TCTACACGAT CTGGGAGTCC
CCCGGGCCGA TCGAGCCGGA CCCGTACCTG AAGTCCTACC CGTGGGCCGC CGGCCTCTCC
AGCTGA
 
Protein sequence
MRRPGRSSFH RSALAAGSLV TVTSMLLAGC GSKASDTDAA SAESCVDTSG PNIKVGSLNS 
LSGTMAISEV TVRDAIKLAV DEINGAGGVM GKQIQLIGED GASEPTVFAE KAEKLISSDC
VAAVFGGWTS SSRKAMLPVF ESANSLLYYP VQYEGLESSK NIFYTGATTN QQIVPALDYL
KEKGVKSLYL VGSDYVFPQT ANRIIKAYAE ANGIAIKGED YTPLGSTDFS TIVNKVRTAD
ADAVFNTLNG DSNVAFFREY KNVGLTPQAM PVVSVSIAEE EVGGIGVQNI TGQLTAWNYY
QTIDTPVNKA FVEAYKKAYG ANKPTSDPME AAYVSVYLWK NTVEKAQSFD VKAIQDNAGG
VTFDAPEGKV TIDGENHHIT KTARIGEIRP DGLIYTIWES PGPIEPDPYL KSYPWAAGLS
S