Gene Mjls_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2328 
Symbol 
ID4878048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2431689 
End bp2432792 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID640139629 
Productinner-membrane translocator 
Protein accessionYP_001070605 
Protein GI126434914 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.228021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0755161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACCT TCGTGGGACG CTGGCAGACG TGGGCGGGGT TCGGCGTGGC GGCGCTGCTG 
CTCTTCGCGG TGGCGCCCGC GGTCCTGTCC GACTTCCGGC TCGGCCTGCT CGGCAAATTC
CTCTGCTTCG CGATCGTCGC GGTCGGCATC GGCCTGGCCT GGGGCCGGGG CGGCATGCTG
GTCCTGGGGC AGGGGGTGTT CTTCGGCCTC GGCGGCTACA TGATGGGCAT GCACCTCAAG
ATCTCCGATG CGCAGCTGCG CGGAGACGAT GTGCCGGACT TCATGCAGAT CGCCGGTGTG
CGCGAATTGC CCGGCTACTG GGCGCCGTTC GCCTCCCCCG CCTTCACGCT GCTGGCGATC
GTCGTGATCC CGACCGGCAT TGCCGCGGTG CTGGGTTTCG GGGTGTTCAA GCGCCGGGTC
AAGGGCGCCT ACTTCGCGAT CCTGTCCCAG GCGCTGGCGG CCGCGCTGGC CATCCTGCTG
GTCGGCCAGA CCGGGCTGGG GGGAAGCAAC GGGCTGACGA ACTTCCGGAC GTTCTTCGGG
TTCGCGCTCA ACGATCCGGT CAACAAGCAG ATGCTCTACT TCATCGCCGC GGCGGTGCTG
CTGATCGTGG TCGCGGTGGT GCGGCAACTA ATGCAGAGCC GCTACGGCGA ACTGCTCGTG
GCGGTGCGCG ACGGTGAGGA GCGGGTGCGC TTCCTCGGCT ACGACCCGGC CAACATCAAG
GTCGTCGCCT ACACGGTGGC CGCGCTGTGC GCCAGCATCG CCGGAGCGCT GTTCGCCCCG
ATCGTCGGAT TCATGGCGCC GTCTCAGGTG GGCATCCTGC CGTCCATCGC CTTCCTCATC
GGCGTCGCGA TCGGTGGCCG CACCACCCTG CTCGGACCGG TGCTCGGCGC CATCGGCGTC
GCGTGGGCGC AAACCCTGTT CTCCGAACGG TTCCCGTCGG AGTGGATCTA CGCCCAGGGC
CTGCTGTTCA TCGTCGTCGT CGGGTTCTTC CCCGCCGGGC TGGCCGGGCT CGGTGTGCTG
CTCAAACGAC GGCGTAGGAA GAAGTCGGAA CCCGTACCCG CACAACCCGA TCCGCAACCC
GAGAAGGTGG GGGCGCCCAC ATGA
 
Protein sequence
MRTFVGRWQT WAGFGVAALL LFAVAPAVLS DFRLGLLGKF LCFAIVAVGI GLAWGRGGML 
VLGQGVFFGL GGYMMGMHLK ISDAQLRGDD VPDFMQIAGV RELPGYWAPF ASPAFTLLAI
VVIPTGIAAV LGFGVFKRRV KGAYFAILSQ ALAAALAILL VGQTGLGGSN GLTNFRTFFG
FALNDPVNKQ MLYFIAAAVL LIVVAVVRQL MQSRYGELLV AVRDGEERVR FLGYDPANIK
VVAYTVAALC ASIAGALFAP IVGFMAPSQV GILPSIAFLI GVAIGGRTTL LGPVLGAIGV
AWAQTLFSER FPSEWIYAQG LLFIVVVGFF PAGLAGLGVL LKRRRRKKSE PVPAQPDPQP
EKVGAPT