| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2316 |
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| Symbol | secF |
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| ID | 4878036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 2417808 |
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| End bp | 2419061 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640139617 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001070593 |
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| Protein GI | 126434902 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.658853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.312291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCTG AAGACAAGAC CGCTGAGGAC ACCGTCAAGA CGGCGGGCAC CGAGACGGCA
CCCCAACACG GCTTCTTCGT CCGGCTCTAC ACGGGCACCG GCGCGTTCGA GGTCGTCGGG
CGCCGCAAGA TGTGGTACGC CATCAGCGGG GTGATCGTCC TCATCGCGCT GGCCAGCATC
CTGATCCGCG GCTTCACCTT CGGCATCGAC TTCGAGGGCG GCACCAAGGT CGGGATGCCG
GTGGCGGGCG CCAACGGCAA CGCCGAGGTC ACCCAGGTCG AGACGGTCTT CAACGAGACC
CTCGGCAAGC CGCCGGAGTC GGTGGTCATC GTCGGCAGCG GTAGCTCGGC CACAGTCCAG
ATCCGGTCGG AGACGCTGTC CAACGACGAG GCCTCCGAGC TGCGGACCGC GCTGTTCGAC
CGCTTCCAGC CGATCGGCGA GGACGGGCAG CCCAGCGAGC AGGCCATCAG CGATTCGGCG
GTGTCCGAGA CGTGGGGCGG CCAGATCACG AAGAAGGCCC TGATCGCGCT GGCGGTGTTC
CTGGTGCTGG CCTCGCTCTA CATCGGGATC CGCTACGAAC GGTGGATGGC GATCGCGGCG
ATGGCCACGC TGTTGTTCGA CCTGGTCGTC ACCGCCGGCG TGTACTCCCT GGTGGGCTTC
GAGGTCAGCC CGGCGACCGT GATCGGTCTG CTCACCATCC TCGGCTTCTC GCTGTACGAC
ACGGTGATCG TGTTCGACAA GGTCGAGGAG AACACGCACG GCTTCGAGCA CACCACCCGA
CGGACGTTCG CCGAACAGGC CAACCTCGCG GTCAACCAGA CGTTCATGCG CTCGATCAAC
ACCAGCCTGA TCTCGGTGCT GCCGATCATC GCGCTGATGG TCATCGCGGT GTGGCTGCTG
GGTGTCGGCA CGCTGATGGA TCTGGCGCTG GTCCAGCTGG TCGGCGTGAT CGTGGGCACC
TACTCGTCGA TCTTCTTCGC CACCCCGCTG CTGGTGTCGC TGCGCGAGCG CACCCAGCTG
GTGCGTGACC ACACCCGCCG CGTGCTCAAC CGGCGCAAGC CGGGCCGCCG CTCGGCGGCG
GTGACCGCGC CGGTCGACGA CGACACCGTG GCCGACGAGC CGGAGAAGGT CACGGCCGCC
AGCGCCCCGG TCACCAGCGC CCCGGCCGAC AAGCCAGCGC CCGGTGCGAA ACCGTCGCGG
CCGACCAGCA GGCCCAGTCG ACCCACGGGT AAGCGCACCT CGCGGGGCCG GTAG
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| Protein sequence | MAAEDKTAED TVKTAGTETA PQHGFFVRLY TGTGAFEVVG RRKMWYAISG VIVLIALASI
LIRGFTFGID FEGGTKVGMP VAGANGNAEV TQVETVFNET LGKPPESVVI VGSGSSATVQ
IRSETLSNDE ASELRTALFD RFQPIGEDGQ PSEQAISDSA VSETWGGQIT KKALIALAVF
LVLASLYIGI RYERWMAIAA MATLLFDLVV TAGVYSLVGF EVSPATVIGL LTILGFSLYD
TVIVFDKVEE NTHGFEHTTR RTFAEQANLA VNQTFMRSIN TSLISVLPII ALMVIAVWLL
GVGTLMDLAL VQLVGVIVGT YSSIFFATPL LVSLRERTQL VRDHTRRVLN RRKPGRRSAA
VTAPVDDDTV ADEPEKVTAA SAPVTSAPAD KPAPGAKPSR PTSRPSRPTG KRTSRGR
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