Gene Mjls_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2213 
Symbol 
ID4877933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2309804 
End bp2310280 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content74% 
IMG OID640139510 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001070490 
Protein GI126434799 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.191743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCGT TCGAAGACGT GGTGGCCGAA CACGGGCCCG TCGTGCTGCG GGTCTGCCGC 
GCCGTCGTGG GCCCGGTCGA CGCGGAGGAC GCCTGGTCGG AGACCTTCCT GTCGGCGCTG
CGGGCCTACC CCGACCTGCC CGCCGACGCC AACGTCGAGG CCTGGCTGGT GACGATCGCG
CACCGGCGCG CACTCGACGT CGGCCGCGCC AACTCCCGCC GGGCCGTCCC GACCGGCACC
GTCCCCGACA GCCCCGCCGT ACGCGGCGAC CCCGCGGACC GACACCCCGA CCTGTGGGCC
GCACTCGAAT CACTGCCCAC CAAACAACGG CAGGCCGTCG CCTACCACCA CATCGCGGGT
CTGCCGTTCG CCGAGATCGC CGGACTGCTC GGCAACTCCC CCGACGCCGC CCGCCGCGCG
TGTGCCGACG GCTTGAGCAG ACTGCGCTCG ATCTACCGCG AGGAGCCCCT CCCATGA
 
Protein sequence
MRPFEDVVAE HGPVVLRVCR AVVGPVDAED AWSETFLSAL RAYPDLPADA NVEAWLVTIA 
HRRALDVGRA NSRRAVPTGT VPDSPAVRGD PADRHPDLWA ALESLPTKQR QAVAYHHIAG
LPFAEIAGLL GNSPDAARRA CADGLSRLRS IYREEPLP