Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_2204 |
Symbol | |
ID | 4877924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2300620 |
End bp | 2302947 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640139501 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001070481 |
Protein GI | 126434790 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0312555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.679079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCGA GGCCCCGAGA AGCGGTCGTG ATCGCCGGGT CCGGTGTCGC CGCTGTGTTG TTGACGATCT GGTTGGTCGG CGAGTTCCCC GGCGCGGCGG CGGCCGACAA CGTCGGCGTG GCCGTGTTCG CCGGCTACGC GGTGGTGTGC GCCGTGCTGG CGGCGCGCGC CGCCTCCGGG CGGATGCGCA ACGTCTGGGT CTGCTTCGCC ATCGCCTTCG GCGGATGGAC GGCAGGCGAG GTCCTCTTCG GGTATCAGGA TCTGGTGCTG GGGCATACGA CGTTCCCCTC GGCCGCGGAT TTCGGGTTCA TCCTGTGCCC GATCTTCAGC TGTCTGGCCC TGGTGCAGTG GCCCGGCGGG GTCGCGGGAC GCTACCGGGT GCGCCTGCTG CTCGACGGGC TGGTCTTCGC ATTGTCGCTG TTCCTGCTCG CGTGGGTGTT GGTGCTGCGC GGCGTCTACG AGAGCTTCCG TGACGACAAA GTGGCGGTCG GCCTGGCCCT GGCGTACCCG CTCCTCGACC TGATGGTGCT CGCCGTAGCC GGGCTGGTCC TGGTCCGCGC GGTTACCTGG CGCCTGCCAC TGGTCCTGCT CACGGCGTCC GTCGTCCTGC TCACCGTGTC CGACATCGCC TTCGCGTGGC TGACCACGCA GGGAACCTAT GCCGCCGTCT TTCCCATCGA CGTGGGCTGG GTGGCCGGGA CCGTGTTCTT CGGCGCCGCG GCGCTGACGA GCCGCGGCAT GGACGCCACC CCGGACACCA CCACGCGGTT GCCCACCAGC GTCTCCCTGT GGTTGCCGTA TCTGCCGCTC CTGGTCGGCG GCACGGTCGC GACGGTCGTG GTGCTCGACG GAGTCCTGGC CGTCACCGTG ATCACCGTGA TCGTCGCCAT CTGCCTGCGC CAGTTCGTCG CGTCGTGGGA GAACCGCAGG CTCATGCGGA TGGTGACCGA TCAGGCGCTG CGCGATCCGC TGACCGGTTT GGCAAACCTC GCGCTGTTCA ACGACCGGCT CGCACACGCG GTCCAGTTAC GGGCACGCGA CGCGGGCGCC GTCGCGGTGC TGTCACTGGA CCTCAACGAC TTCAAGGTCG TCAACGACAG CCTCGGCCAC TCAGCGGGCA ACGAACTGCT CACCCAGGTC GCCGACCGCC TGGTGAAGTG CGTGCGGGCC GGTGACACCG TGGCGCGAGT CGGGGGCGAC GAGTTCGCCG TGCTGATCGA GGACCGTGTC GACCACTCGC TGGCGATCGC GCACCGCATC GTGGAAGCCT TCGACTCACC GTTCCACGTC GAGGGCGAGA GCCTGCTGAT GCGGCCCAGC GTCGGCCTGG CCGTCGCCGC ACCGGACGAC GAACTCGAAC CGTCGGGTGA GCAACTCTTC AGGCGTGCGG ACGCGGCGAT GTACGCCGCC AAGCGGTCCC GCACCGAGGG TGTCCACGTG TTCAGCCCGG AGATGACGCC GGCGAACACC GAACAATCGG CGCTGCTGCG GGTTTCGGAC CACGGCGCCC GAGGGGGTGG TGTGTCGGCG GTCCAGCTGC TCGGCGAGCT GCGCCAGGCC ATCGACCGTC GCGAACTGGA CGTGGTGTAT CAGCCCAAAT ACCACCTGGC GACGTCCGAA CTCGCCGGCG TGGAGGCGTT GGTGCGGTGG CCGCACCCCG TGCACGGCAC CCTCAATCCG GGCGACTTCC TGCCGATGGT GCGCAGGCAC GGCCTGATGG GGGCGCTCAC CGACCTGGTG GTCGACAAGG CGCTCGACCA CGCCGCCGGA TGGGTGGCGA CCGGCACCCC GGTGCCCGTC GCGGTGAACC TGTTCGCGGC GACCATGGCC GACACCGACC TGCCGGACAA GATCGTCGCG GCACTCGAGT CGCGCGGGCT GGCGCCCGCC GGACTGACCG TCGAGATCAC CGAGGACCTG ATCCTGCCCG ACTTCAAGCG GACGTGCGCG GTGTTGCAGG AGCTACGCCG CCGAGGCGTG CGGGTGGCCA TCGACGATTT CGGCAGCGGG TACTCGGCGC TGAGCTATCT GCGGGAACTG CCGATCGACG AGGTCAAACT GGACCGCCGG TTCATCGGTC CGATCATCTG GGACCCGAGG GCCGGCGAGG TGGTCCGCGC GGTGGTCAGC CTCGCGCAGA CCCTGGGACT GACGACGGTG GCGGAGGGCG TCGAGAACGC GGAGACCGCC GAACGCCTCC GCGATTACGG GTGCGATGTG GCGCAGGGTT TCCACTACAG CCCGCCATTG AGCGCGCCCG GGGTCACGGC GCTGCTGCGG GCGGAGACTA TCCGCCCGCC GGCACCAGCC GCAGTGAGAT GGAATTGA
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Protein sequence | MRARPREAVV IAGSGVAAVL LTIWLVGEFP GAAAADNVGV AVFAGYAVVC AVLAARAASG RMRNVWVCFA IAFGGWTAGE VLFGYQDLVL GHTTFPSAAD FGFILCPIFS CLALVQWPGG VAGRYRVRLL LDGLVFALSL FLLAWVLVLR GVYESFRDDK VAVGLALAYP LLDLMVLAVA GLVLVRAVTW RLPLVLLTAS VVLLTVSDIA FAWLTTQGTY AAVFPIDVGW VAGTVFFGAA ALTSRGMDAT PDTTTRLPTS VSLWLPYLPL LVGGTVATVV VLDGVLAVTV ITVIVAICLR QFVASWENRR LMRMVTDQAL RDPLTGLANL ALFNDRLAHA VQLRARDAGA VAVLSLDLND FKVVNDSLGH SAGNELLTQV ADRLVKCVRA GDTVARVGGD EFAVLIEDRV DHSLAIAHRI VEAFDSPFHV EGESLLMRPS VGLAVAAPDD ELEPSGEQLF RRADAAMYAA KRSRTEGVHV FSPEMTPANT EQSALLRVSD HGARGGGVSA VQLLGELRQA IDRRELDVVY QPKYHLATSE LAGVEALVRW PHPVHGTLNP GDFLPMVRRH GLMGALTDLV VDKALDHAAG WVATGTPVPV AVNLFAATMA DTDLPDKIVA ALESRGLAPA GLTVEITEDL ILPDFKRTCA VLQELRRRGV RVAIDDFGSG YSALSYLREL PIDEVKLDRR FIGPIIWDPR AGEVVRAVVS LAQTLGLTTV AEGVENAETA ERLRDYGCDV AQGFHYSPPL SAPGVTALLR AETIRPPAPA AVRWN
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