| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2143 |
|---|
| Symbol | |
|---|
| ID | 4877863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2241404 |
|---|
| End bp | 2242168 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640139440 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001070420 |
|---|
| Protein GI | 126434729 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.410301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00273031 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGG CCGGGCACGC CAGTCAGGCG GTGCCGATGA TCTCGATGCA GGAGGTCAAC
AAGCATTTCG GCGATCTCCA CGTGCTCAAG GACATCAACC TGAGGGTCGA GCGGGGTCAG
GTCGTGGTGG TGCTCGGCCC GTCGGGGTCC GGCAAATCCA CGCTGTGCCG CACGATCAAC
CGGCTCGAGA CCATCGACTC GGGCACGATC GCCATCGACG GCGAGGTGCT TCCCGACGAG
GGACGCAAGC TCGCACAGTT GCGCTCCGAC GTCGGCATGG TGTTCCAGTC GTTCAACCTG
TTCGCGCACA AGACGATCCT CGACAACGTC ACGCTGGCGC CGATGAAGGT GCGCGGACTC
GGCAAGGACG CCGCGAGGGA GGCCGCGATG GCGCTGCTGG AGCGGGTCGG GGTCGCCAAT
CAGGCCGACA AGTACCCCGC CCAGTTGTCG GGCGGTCAGC AGCAACGCGT CGCGATCGCC
CGCTCGCTCG CGATGAACCC CAAGGTGATG CTCTTCGACG AGCCGACCAG CGCGCTGGAC
CCCGAGATGA TCAACGAGGT GCTGTCGGTG ATGACCGCGC TGGCGAGCGA GGGTATGACC
ATGCTGGTGG TGACCCATGA GATGGGCTTC GCCCGCCGCG CCTCGGACCG GGTGGTCTTC
ATGTCCGACG GGGCGATCGT CGAGGACGCC GAGCCGGCCC AGTTCTTCGA CAATCCGCAG
ACCGACCGCG CCAAGGACTT CCTCGGCAAG ATCCTCCATC ACTAA
|
|---|
| Protein sequence | METAGHASQA VPMISMQEVN KHFGDLHVLK DINLRVERGQ VVVVLGPSGS GKSTLCRTIN
RLETIDSGTI AIDGEVLPDE GRKLAQLRSD VGMVFQSFNL FAHKTILDNV TLAPMKVRGL
GKDAAREAAM ALLERVGVAN QADKYPAQLS GGQQQRVAIA RSLAMNPKVM LFDEPTSALD
PEMINEVLSV MTALASEGMT MLVVTHEMGF ARRASDRVVF MSDGAIVEDA EPAQFFDNPQ
TDRAKDFLGK ILHH
|
|---|
| |