Gene Mjls_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2122 
Symbol 
ID4877842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2224136 
End bp2224444 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID640139419 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001070399 
Protein GI126434708 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.717614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0140851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTTGG CGGTACCGGG AAAGATCGAC AGCGTCACCG ACCGTGACGG CACGCTGATG 
GCCGTCGTCG ACTTCGGTGG CATCAAGAAA GACGTATGCC TGCAGTACAT CCCGGACGCG
CAGGTCGGGC AGTACGTCGT GGTGCACGTG GGTTTCGCGA TCCAGCGTCT CGACGAGGAA
TCGGCGATGC GCACGCTGCG GGAGTTCGAG CACCTCGGGG TGCTCGAGGA GGAGTTCGGT
GACGGTTTCG AACTCGCCGC ACGTCAGGCC GGGCTGGCCA ACCCGAATGG TGAGAGGGCA
CAGGGATGA
 
Protein sequence
MCLAVPGKID SVTDRDGTLM AVVDFGGIKK DVCLQYIPDA QVGQYVVVHV GFAIQRLDEE 
SAMRTLREFE HLGVLEEEFG DGFELAARQA GLANPNGERA QG