Gene Mjls_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2104 
Symbol 
ID4877824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2209055 
End bp2210731 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content69% 
IMG OID640139401 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001070381 
Protein GI126434690 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.739055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.176892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAACG ACCTCGTCCC GCCCGGCCCG CTCGCGGTCG GCGGGTTGCG CGTGACCGCG 
CTGGGCGGCA TCAGCGAGAT CGGCCGCAAC ATGACCGTTT TCGAGCATCT CGGCCGTCTG
CTCATCATCG ACTGCGGGGT GCTGTTCCCC GGCCACGACG AACCCGGTGT GGACCTGATC
CTGCCGGATC TGCGCCACGT CGAGGAGCGT CTCGACGACG TCGAGGCGCT GGTGCTCACC
CATGCGCACG AAGACCACAT CGGCGCCGTG CCGTTCCTGC TCAAACTGCG GCCCGACATC
CCGGTCGTCG GTTCACGGTT CACCCTCGCC CTGGTGCGCG AGAAGTGCCG CGAACACCGG
ATCAAGCCGA AGTTCGTCGA GGTGGCCGAG GGGCAGCGCA GCACCCACGG CGTCTTCGAA
TGCCAGTATT TCGCGGTCAA CCACTCGGTG CCGGGATGTC TGGCCATCGC GCTGCACACC
GGCGCCGGAA CCGTGCTGCA CACCGGTGAC ATCAAACTCG ATCAGCTCCC GCTCGACGGG
CGGCCCACCG ATCTGCCGGG GATGTCGCGC CTCGGTGACG CCGGCGTCGA CCTGTTCCTC
TGTGATTCGA CCAACGCCGA CCGCCCCGGT GTCGGACCGT CGGAGAGCGA GATCGGGCCG
ACGCTGCACC GGCTGATCCG CGGCGCGGAC GGACGCGTGA TCGTCGCGTG CTTCGCCTCC
AACGTCGACC GGGTGCAGCA GATCATCGAC GCGGCGGTGG CGCTGGGCCG TCGGGTGTCC
TTCGTGGGCC GCTCGATGGT GCGCAACATG GGCATCGCCC GCGAACTGGG ATACCTCAAG
GTCGACGACA GCGATCTGCT CGACATCGGC GCCGCCGAGA TGATGCCGGC GGAGAAGGTC
GTGCTGATCA CCACCGGAAC GCAGGGTGAG CCCATGTCGG CGCTGTCGCG GATGTCGCGC
GGGGAGCACC GCAGCATCAC GCTGACCGAC GGGGACCTGA TCATCCTGTC CTCGTCGCTG
ATCCCCGGCA ACGAGGAGGC CGTCTACGGC GTCATCGACT CACTGTCCAA GATCGGGGCC
AGGGTCGTCA CCAACGCCCA TGCGCGCGTG CATGTCTCGG GTCACGCGTA CGCCGGCGAG
CTGCTGTTCC TCTACAACGG CGTCAAACCG CGCAACGTGA TGCCCGTGCA CGGCACCTGG
CGGCACCTGC GCGCCAACGC CGCGCTGGCC GAGCGCACCG GGGTTCCGCC CGAGTCGATC
GTGTTGGCGG AGAACGGCGT CAGCGTGGAT CTGGTCGCCG GGAAGGCGAG CATCGCCGGT
GCGGTCGGCG TCGGGAAGAT GTTCGTCGAC GGGCTGGTCA CCGGTGACGT GGGTGAGACC
ACACTGGGTG AGCGTCTCGT TCTCTCTTCG GGTTTCGTCG CGGTCACCGT CGTCGTGCAT
CGGGGGACCG GCCGCCCGGC CGGCCCGGCC CACCTGGCGT CCCGAGGCTT CTCCGAGGAC
CCCAAGGCGC TCGAACCGGT CGCGCGCAAG GTCGAAGAGG AACTCGAGAG GCTGACCGCC
GATACGGTCA CCGACCCGGG CCGCATCGCC CAGGCGGTGC GGCGCACCGT CGGCAAGTGG
GTGGGCGAGA CCTACCGACG CCAGCCGATG ATCGTGCCCA CGGTCATCGA GATCTGA
 
Protein sequence
MNNDLVPPGP LAVGGLRVTA LGGISEIGRN MTVFEHLGRL LIIDCGVLFP GHDEPGVDLI 
LPDLRHVEER LDDVEALVLT HAHEDHIGAV PFLLKLRPDI PVVGSRFTLA LVREKCREHR
IKPKFVEVAE GQRSTHGVFE CQYFAVNHSV PGCLAIALHT GAGTVLHTGD IKLDQLPLDG
RPTDLPGMSR LGDAGVDLFL CDSTNADRPG VGPSESEIGP TLHRLIRGAD GRVIVACFAS
NVDRVQQIID AAVALGRRVS FVGRSMVRNM GIARELGYLK VDDSDLLDIG AAEMMPAEKV
VLITTGTQGE PMSALSRMSR GEHRSITLTD GDLIILSSSL IPGNEEAVYG VIDSLSKIGA
RVVTNAHARV HVSGHAYAGE LLFLYNGVKP RNVMPVHGTW RHLRANAALA ERTGVPPESI
VLAENGVSVD LVAGKASIAG AVGVGKMFVD GLVTGDVGET TLGERLVLSS GFVAVTVVVH
RGTGRPAGPA HLASRGFSED PKALEPVARK VEEELERLTA DTVTDPGRIA QAVRRTVGKW
VGETYRRQPM IVPTVIEI