Gene Mjls_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2058 
Symbol 
ID4877779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2167105 
End bp2168694 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content68% 
IMG OID640139356 
Productmajor facilitator transporter 
Protein accessionYP_001070336 
Protein GI126434645 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.283059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC TCAACGACGC AGAGCGCGCA GCCATGTTCC GCGACGCCGA AGGCCGGTCC 
AAGCGCGCGC AGACGACGGG TCAACCGATG GGCTCCGCAC CGACGTCCGT CGGGCGCGCG
AAGACATCGA CCTGGTTACC GTCACGGCGC TTCTTCGCCG CGGTGATCGC CATCGCCGGC
ATGCAGTTGA TGGCCACGAT GGACGGCACC ATCGCCATCG TCGCGCTCCC CAAGATCCAA
AACGAGCTGA TGCTGTCCGA CGCGGGCCGC AGCTGGGTCA TCACGGCCTA CGTGCTGACC
TTCGGCGGCC TGATGCTCCT CGGCGGCCGC CTCGGCGACA CCATCGGCCG TAAGCGCACC
TTCATCGTGG GCGTCGCGTT GTTCACCATC GCCTCGATCC TGTGCGGTAT CGCCTGGGAC
GAGGTCACGC TGGTGATCGC CCGGCTGTTA CAGGGCGTCG GTGCCGCAAT CGCTTCGCCG
ACCGCATTGG CGCTCGTCGC CACCACCTTC CCGAAAGGCC CGGCCCGCAA CGCGGCCACC
GCGGTGTTCG CCGCGATGAC CGGCGTCGGC TCGGTGATGG GCCTGGTCGT GGGTGGGGCG
CTCACCGAGG TGTCGTGGCG GCTGGCGTTC CTGGTGAACG CACCCATCGG CTTGCTGATC
GTCTACTTGG CGCACACCGC GCTCCGTGAG ACGCACAAAG AGCGGCTCAA GCTCGACGCC
ACCGGCGCGC TGCTCGCGAC GCTGGGTTGC ACCGCCGCCG TGTTCGGCTT CTCGATGGGT
CCGGAGAAGG GTTGGCTCTC GTCGGTCACC ATCGCGTCGA TCGCTGCCGC CGGCGTCTTC
CTGCTCGCCT TCATCTTCGT CGAGCGCTCT GCGGAGAACC CCGTGGTGCC GTTCGTGCTC
TTCAAGGACC GCAACCGGCT CGCCACGTTC GCCGCGGTGT TCTTGGCCGG TGGCGTGATG
TTCACCCTCT CGGTGCTGAT CGGCCTGTAC GTGCAGGACA TCCTCGGCTA CAGCCCGCTG
CGCGCCGGGA TCGGCTTCAT CCCGTTCGCC ATCGCGATGG GTATCGGGTT GGCCGTCTCC
TCGCAGCTGG TGCCGATTCT GCCGCCGCGG ATCCTGGTGA TCTCCGGCGG CGTGCTGGTG
CTGGGCGCCA TGATCTACGG CTCGACGCTC AACAGCGGCA TCCCGTACTT CCCGAACCTG
GTGATCCCGC TCGTGGTCGG CGGTATCGGA ATCGGAATCA TCTTCGTCGC GCTGATGCTG
TCGGCCATCG CCGGTGTCGG TTTCGACCAG ATCGGCCCTG TGTCGGCGAT CACGCTGATG
CTGCAGAATC TCGGCGGCCC GGTCGTGCTG GCGGTCATCC AGGCGGTGAT CACCTCCCGC
ACGCTGTACC TCGGCGGCAC CACCGGACCG GTCAAGAACA TGGACGGCAC CCAGATCGCC
GCGCTCGACG CCGGTTACAC CTACGGGCTG CTGTGGGTGG CCGCGGTGGC GGTCCTCGTG
GGTGGTGCGG CACTGCTGAT CGGCTACACC TCCCAGCAGG TCGCGCACGC CCAGGAGGTC
AAGGACGCGC TCGACGCCGG TGAGCTCTGA
 
Protein sequence
MTALNDAERA AMFRDAEGRS KRAQTTGQPM GSAPTSVGRA KTSTWLPSRR FFAAVIAIAG 
MQLMATMDGT IAIVALPKIQ NELMLSDAGR SWVITAYVLT FGGLMLLGGR LGDTIGRKRT
FIVGVALFTI ASILCGIAWD EVTLVIARLL QGVGAAIASP TALALVATTF PKGPARNAAT
AVFAAMTGVG SVMGLVVGGA LTEVSWRLAF LVNAPIGLLI VYLAHTALRE THKERLKLDA
TGALLATLGC TAAVFGFSMG PEKGWLSSVT IASIAAAGVF LLAFIFVERS AENPVVPFVL
FKDRNRLATF AAVFLAGGVM FTLSVLIGLY VQDILGYSPL RAGIGFIPFA IAMGIGLAVS
SQLVPILPPR ILVISGGVLV LGAMIYGSTL NSGIPYFPNL VIPLVVGGIG IGIIFVALML
SAIAGVGFDQ IGPVSAITLM LQNLGGPVVL AVIQAVITSR TLYLGGTTGP VKNMDGTQIA
ALDAGYTYGL LWVAAVAVLV GGAALLIGYT SQQVAHAQEV KDALDAGEL