| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2027 |
|---|
| Symbol | ispG |
|---|
| ID | 4877748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2134398 |
|---|
| End bp | 2135579 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640139325 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_001070305 |
|---|
| Protein GI | 126434614 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.873877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0985833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCG GCCCCGCCAT CGGGCTTGGT ATGCCGCCCG CACCCCCGCC GGTGCTGGCA
CCGCGGCGCA AGACCCGTCA GCTGATGGTG CGCGACGTCG GCGTGGGCAG CGATCATCCG
ATCTCGGTCC AGTCCATGTG CACCACCAAG ACCCACGACA TCAACTCGAC CCTGCAGCAG
ATCGCCGAAC TCACCGCGTC GGGCTGCGAC ATCGTCCGGG TGGCGTGCCC GCGGCAGGAG
GACGCCGACG CGCTGCCGAT CATCGCCAAG AAGTCGAAGA TCCCGGTGAT CGCCGACATC
CACTTCCAGC CGAAGTACAT CTTCGCCGCG ATCGACGCCG GATGTGCGGC GGTGCGCGTC
AACCCCGGCA ACATCAAGGA GTTCGACGGT CGGGTCAAGG AGGTGGCCAA GGCCGCCGGT
GACGCCGGCA TCCCGATCCG CATCGGCGTC AACGCCGGAT CGCTGGACAA GCGATTCCTG
CAGAAGTACG GCAAGGCCAC GCCCGAGGCG CTCGTCGAGT CGGCGCTGTG GGAGGCCTCG
CTGTTCGAGG AGCACGGCTT CGGCGACATC AAGATCAGCG TCAAGCACAA CGACCCCGTC
GTGATGGTCG CGGCCTACGA GTTGCTGGCC GCCCGCAGCG ACTACCCGCT TCACCTCGGT
GTCACCGAGG CCGGCCCGGC GTTCCAGGGG ACGATCAAGT CCGCGGTCGC CTTCGGCGCG
TTGCTCTCCA AGGGCATCGG CGACACCATC CGGGTCTCGC TGTCCGCGCC GCCGGCCGAG
GAGGTCAAGG TCGGCAACCA GATCCTCGAA TCGCTCAACC TGCGCCCGCG CGGTCTGGAG
ATCGTGTCCT GCCCGTCGTG CGGACGCGCC CAGGTCGACG TGTACACCCT CGCCAACGAG
GTCACCGCCG GCCTCGAGGG CATGGACGTC CCGTTGCGCG TCGCCGTCAT GGGCTGTGTC
GTCAACGGTC CCGGCGAAGC CCGCGAAGCC GATCTCGGGG TGGCCTCCGG CAACGGCAAG
GGTCAGATCT TCGTCAAGGG TGAGGTCATC AAGACCGTGC CCGAGGCGCA GATCGTCGAG
ACGCTGATCG AGGAGGCCAT GCGCATCGCG GAGGAGATCG GCGCCGCCGG TGACAGCCCC
GAGGGAAGTC CCAGCGGTTC GCCGGTTGTG ACCGTAAGCT GA
|
|---|
| Protein sequence | MTSGPAIGLG MPPAPPPVLA PRRKTRQLMV RDVGVGSDHP ISVQSMCTTK THDINSTLQQ
IAELTASGCD IVRVACPRQE DADALPIIAK KSKIPVIADI HFQPKYIFAA IDAGCAAVRV
NPGNIKEFDG RVKEVAKAAG DAGIPIRIGV NAGSLDKRFL QKYGKATPEA LVESALWEAS
LFEEHGFGDI KISVKHNDPV VMVAAYELLA ARSDYPLHLG VTEAGPAFQG TIKSAVAFGA
LLSKGIGDTI RVSLSAPPAE EVKVGNQILE SLNLRPRGLE IVSCPSCGRA QVDVYTLANE
VTAGLEGMDV PLRVAVMGCV VNGPGEAREA DLGVASGNGK GQIFVKGEVI KTVPEAQIVE
TLIEEAMRIA EEIGAAGDSP EGSPSGSPVV TVS
|
|---|
| |