Gene Mjls_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2024 
Symbol 
ID4877745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2131071 
End bp2131793 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID640139322 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_001070302 
Protein GI126434611 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.118712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA CGTCGAGCAA GACAACGTTG GTGAGCAGCA CCCGGCCGCA CGCACGCCGT 
AGGACGATGG CCGCCGCCGG CCTGAGCGCC CTGGCGATCC TCGGCGTCGC GGCCTGTTCG
AGCGAAGAGG CCGGGAGCAA CGCCTCCTCG GCGACGAGCG CGGCCTCGTC GGCCGTCGAA
TCCGCCACCT CGTCGGCGCC GACGTCGAGT GCGGCCGCCG ACCCCGCCGC GAACCTGGTC
GGTTCGGGCT GCGCGGCCTA CGCCGAGCAG GTGCCCAGCG GACCGGGTTC GGTCGCCGGG
ATGGCCCAGG AGCCCGTGAC GGTGGCGGCG TCGAACAACC CGATGCTCAA GACGCTGTCG
CAGGCGCTGT CCGGTCAGCT GAACCCGAAC GTGAACCTGG TCGCCACCCT CGACGGCGGT
GAGTTCACCG TCTTCGCCCC CACCGACGAC GCGTTCGCCA AGCTCGACCC CGCCACCATC
GAGACGCTGA AGACGGATTC GGACCTGCTC ACCAGCATCC TGACCTACCA CGTCGTGCCG
GGTCAGGCCG CTCCCGATCA GGTGCCCGGC GACCACAAGA CCGTTCAGGG CGCCAACGTC
ACCGTCACCG GCGAGGGCGA GGCCATCAAG GTCAACGAGG CCGGCCTGGT CTGCGGCGGT
GTGCAGACCG CCAACGCCAC GGTCTACATG ATCGACACCG TGCTGATGCC GCCGGCGAAC
TGA
 
Protein sequence
MKTTSSKTTL VSSTRPHARR RTMAAAGLSA LAILGVAACS SEEAGSNASS ATSAASSAVE 
SATSSAPTSS AAADPAANLV GSGCAAYAEQ VPSGPGSVAG MAQEPVTVAA SNNPMLKTLS
QALSGQLNPN VNLVATLDGG EFTVFAPTDD AFAKLDPATI ETLKTDSDLL TSILTYHVVP
GQAAPDQVPG DHKTVQGANV TVTGEGEAIK VNEAGLVCGG VQTANATVYM IDTVLMPPAN