Gene Mjls_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_2000 
Symbol 
ID4877721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2108233 
End bp2109132 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID640139298 
Productintegrase catalytic subunit 
Protein accessionYP_001070278 
Protein GI126434587 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCT TTCAGTTTGT CGCCGACCAC CTGCACGCCT TCGAGGTGAA GTGGCTCTGC 
GCAGTCGTCG AGGTTGCGCG TTCGTCGTTC TACGCGTGGT TGGCCGGTGC TGACGGACGA
GCGGCCCGTC GGGCTGCTGA CGAGGCGCTG GCCGAGCGTA TCCGCGCCGT CCACGACGAG
GACAACACCT ACGGGGCGCC GCGGATCACC GCCGAGCTCA ACGACGGTGC GCCCGAGGGG
CAGCGGGTCA ACCACAAGCG GGTGGCTCGG GTGATGCGCG GCGCCGGGAT CGCCGGTTAT
CGACGCCGAC GTCGGGTCAA GACGACCGTG GCGGACCCGG CGAACCAGAA GGTCCCCGAC
CTGCTCAAAC GCGATTTCAC CGCCGCGCAG GTCAACACCC GTTACGTCGG CGACATCACC
TACTTGCCAT TGGCGACCGG CGCCAACCTG TACCTGGCCA CCGTGATCGA CTGCTGTTCA
CGGCGGGTCG CCGGGTGGGC GATCGCCGAT CACATGCGCA CCGAACTGGT CATCGATGCG
CTCAAAGCCG CTGCTGCACT GCGGGGTTCA CTGGCTGGTG CAATATTCCA TGCAGATCAT
GGAAGTCAGT ACACCTCACG GGATTTCGCG AATCTCTGCC GCGATCTGGG GGTCGTCCAG
TCGATGGGTG CGGTGGGGTC AAGTGCCGAT AACGCGTTGG CCGAATCGTT CAACGCCGCC
CTCAAGCGCG AGATTCTGCA AGACCGTGCC TGCTGGCCGG ACGCGGCGAT CTGCCGCCGT
GAGGTCTTTC GGTGGCTGGC CCGCTACAAC ACCACACGAC GGCACTCCTA CTGCCGTCAT
TCCAGCCCCG CGACCTACGA AAGGAACCTG ACACCGGCTA CGCTGCCCGA AGCCGCATAA
 
Protein sequence
MSRFQFVADH LHAFEVKWLC AVVEVARSSF YAWLAGADGR AARRAADEAL AERIRAVHDE 
DNTYGAPRIT AELNDGAPEG QRVNHKRVAR VMRGAGIAGY RRRRRVKTTV ADPANQKVPD
LLKRDFTAAQ VNTRYVGDIT YLPLATGANL YLATVIDCCS RRVAGWAIAD HMRTELVIDA
LKAAAALRGS LAGAIFHADH GSQYTSRDFA NLCRDLGVVQ SMGAVGSSAD NALAESFNAA
LKREILQDRA CWPDAAICRR EVFRWLARYN TTRRHSYCRH SSPATYERNL TPATLPEAA