| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1970 |
|---|
| Symbol | xerC |
|---|
| ID | 4877692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2079947 |
|---|
| End bp | 2080849 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640139269 |
|---|
| Product | site-specific tyrosine recombinase XerC |
|---|
| Protein accession | YP_001070249 |
|---|
| Protein GI | 126434558 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.397741 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTCCG TCCTCGACGC GTTCGACCAG TACCTCGCGC TGGAACGAGG GCGCTCCGAC
CACACCCGGC GGGCCTACCT GGGCGATCTG CGGTCGCTGT TCGCGTTCGT CGACGAACGG
ACCCCCGGCG CCGACCTCGG ATCCCTGACC CTGCCGGTGC TGCGCGCCTG GCTCTCCGCG
CAGGCGGCCG CCGGAACCGC CCGCACCACC CTGGCCCGCC GGACGTCGGC GGTGAAGACG
TTCACCGCCT GGGCTGTGCG GCGCGGGCTG ATGGCGAGTG ACCCGGCGAC GCGGCTGCAG
ATGCCGAAGG CGCGACGGAC ACTGCCCGCG GTGCTGCGGC AGGATCAGGC GCGCGACGCC
CTCGACGCCG CCAATTCCGG TGCACAGCAG GGAGACCCGC TGGCGTTGCG CGACAGGTTG
ATCGTCGAGA TGCTCTACGC GACCGGGATC CGCGTCAGCG AGCTGTGCGG CCTCGACATC
GACGACGTCG ACACCTCCCG ACGGCTGCTG CGCGTCCTCG GTAAAGGCGA CAAGCAGCGC
ACCGTCCCGT TCGGCGAACC GGCCGAGCAG GCGTTGCGGG CGTGGCTGAC CAGCGGCCGT
CCGGCGCTGG CCACCGCCGA GTCCGGCCCG GCACTGCTGC TCGGCGCGCG CGGTCGGCGC
CTCGACCCGC GTCAGGCCCG CACCGTCGTG CACGAGACCG TCGGCGCGGT GGCTGGGGCA
CCCGACATCG GGCCGCACGG CCTGCGGCAC AGCGCCGCCA CCCACCTGCT CGAAGGCGGT
GCGGACCTGC GGATCGTGCA GGAACTGCTG GGCCACTCGA CGCTCGCGAC CACCCAGCTG
TACACCCACG TCACCGTCGC GCGGCTCCGC GCCGTCCACG ACCAGGCCCA CCCGCGGGCC
TGA
|
|---|
| Protein sequence | MESVLDAFDQ YLALERGRSD HTRRAYLGDL RSLFAFVDER TPGADLGSLT LPVLRAWLSA
QAAAGTARTT LARRTSAVKT FTAWAVRRGL MASDPATRLQ MPKARRTLPA VLRQDQARDA
LDAANSGAQQ GDPLALRDRL IVEMLYATGI RVSELCGLDI DDVDTSRRLL RVLGKGDKQR
TVPFGEPAEQ ALRAWLTSGR PALATAESGP ALLLGARGRR LDPRQARTVV HETVGAVAGA
PDIGPHGLRH SAATHLLEGG ADLRIVQELL GHSTLATTQL YTHVTVARLR AVHDQAHPRA
|
|---|
| |