Gene Mjls_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1962 
Symbol 
ID4877684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp2071427 
End bp2072455 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID640139261 
Productextracellular solute-binding protein 
Protein accessionYP_001070241 
Protein GI126434550 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.139482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.859404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAC GTTTGAGCCG GATCAGCCGC CCGATCGTCG CCGTAGTGTC GGCCCTCGCG 
GTGGTGACCG GTCTGGCCGC CTGCTCGAGT TCGGACGACT CCGACGAACT GCTGATCTAC
AACGCCCAAC ACGAGTCGCT GACCAAGGAG TGGATCGACG CCTTCACCAA GGAGACCGGC
ATCAAGGTGT CCTACCGTCA GGGCGGCGAC ACCGAACTCG GCAACCAACT GGTCGCCGAG
GGCGATGCCT CACCGGCCGA CGTCTTCCTG ACCGAGAACT CCCCCGCCAT GGCCGCCGTC
GAGCGCGCCG GACTGTTCGC CGACCTCGAC GCCGCCACGA TCGACCAGGT TCCAGCGCAG
TACCGTCCGG CCACCGGTAA GTGGACCGGC GTCGCCGCGC GCAGCACGGT GTTCGTCTAC
AACCCGTCCC GGCTCAAGGC CGATCAGCTG CCGAAGTCCC TGCTCGATCT GCAGCAGCCC
GAATGGAAGG GCCGCTGGGG CGCACCGCCG GCCAAGGCCG ACTTCCAGGC GATCGTCGCC
GCGTTGCTCC AGTTGGAGGG CGAGCCCGCG ACCGCGCAGT GGCTGGCCGG GATGAAGGCG
AACGCGGTCA TCTACAACGA CAACATCGCC ACACTCAAGG CCGTCAACGC CGGTGAGGTC
GACGGCGGCG TGATCTACCA CTACTACTGG TTCCGCGATC AGTCCAAGAC CAAGGAGATC
AGCGGCAACA CCGCGCTGCA CTACTTCAAG AACCAGGATC CGGGCGCGTT CGTCAGCCTC
TCCGGCGGCG GGGTGCTCGA GTCGAGCGAC AAGAAGGACC AGGCGCAGCA GTTCATCACG
TTCATCACCG GTAAGGCCGG TCAGGAAGTG CTCGAGAAGG GCACCTCGTT CGAGTACCCG
GTCGCCAGCG GGGTGCCCGC CAACCCCGCT CTGCCGCCGT TGGACACCTT GCAGGCACCG
ACGGTCGATC CCTCGACGCT GGACGCGCAG AAGGTGACCG ATCTGATGAC GAAGGCTGGC
TTGCTGTAG
 
Protein sequence
MRPRLSRISR PIVAVVSALA VVTGLAACSS SDDSDELLIY NAQHESLTKE WIDAFTKETG 
IKVSYRQGGD TELGNQLVAE GDASPADVFL TENSPAMAAV ERAGLFADLD AATIDQVPAQ
YRPATGKWTG VAARSTVFVY NPSRLKADQL PKSLLDLQQP EWKGRWGAPP AKADFQAIVA
ALLQLEGEPA TAQWLAGMKA NAVIYNDNIA TLKAVNAGEV DGGVIYHYYW FRDQSKTKEI
SGNTALHYFK NQDPGAFVSL SGGGVLESSD KKDQAQQFIT FITGKAGQEV LEKGTSFEYP
VASGVPANPA LPPLDTLQAP TVDPSTLDAQ KVTDLMTKAG LL