| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1952 |
|---|
| Symbol | rnhB |
|---|
| ID | 4877674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 2059017 |
|---|
| End bp | 2059736 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640139251 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_001070231 |
|---|
| Protein GI | 126434540 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.713982 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGCGT CATGGCCGCC CCGCACGGTG ATCCGCAAGG CCTCCGGCCT GCGAACCCTC
GAGTCCGCGC TGTACCGCAA CGGGCTCGGA CCGGTGGCCG GGGTGGACGA GGTGGGCCGC
GGGGCCTGCG CGGGCCCGCT GGTGGTCGCG GCGTGCGTCC TCGGCCCGAA CCGGTTGGAG
AGCCTCGCCG CGCTCGACGA TTCGAAGAAG CTCGGTGAGA AAGAGCGTGA GCGGCTGTTC
CCGGTGATCC GTCGCTATGC GCTGGCCTAT CACGTGGTGT TCATCCCTTC CGGAGAGGTG
GACCGCCGCG GTGTGCACGT CGCCAACATC GAGGGCATGC GGCGGGCGGT GGCCGGTCTG
TCGGTGCGGC CGGGTTACGT GCTGTCCGAC GGGTTCCGGG TTCCGGGGCT GCCGATGCCG
TCGTTGCCGG TCGTCGGGGG TGACGCCGCG GCCGCCTGCA TCGCGGCGGC CAGCGTGCTG
GCCAAGGTGA GCCGCGACCG GTTGATGGTG GCGATGGAGC GCGAGCATCC CGGCTACGGT
TTCGCCGAGC ACAAGGGGTA CAGCACACCG GCGCACACCG CCGCGCTGGC CGAACTCGGC
CCGTGCGCCC AGCACCGTTA CTCGTTCATC AACGTGCGCC GGTTGGTCAC CGCGGGTACC
CCGCAGATCA GCGGGGGGCT GACCGACGCC GAACCCGGGC AGTGCTGTGA ACTCGGATAG
|
|---|
| Protein sequence | MPASWPPRTV IRKASGLRTL ESALYRNGLG PVAGVDEVGR GACAGPLVVA ACVLGPNRLE
SLAALDDSKK LGEKERERLF PVIRRYALAY HVVFIPSGEV DRRGVHVANI EGMRRAVAGL
SVRPGYVLSD GFRVPGLPMP SLPVVGGDAA AACIAAASVL AKVSRDRLMV AMEREHPGYG
FAEHKGYSTP AHTAALAELG PCAQHRYSFI NVRRLVTAGT PQISGGLTDA EPGQCCELG
|
|---|
| |