Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1948 |
Symbol | trmD |
ID | 4877670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2055798 |
End bp | 2056481 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640139247 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_001070227 |
Protein GI | 126434536 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.478669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAATTG ACGTCATCAC GATCTTCCCG CGCTACCTCG ATCCGCTTCG AGAATCGTTG CCCGGCAAGG CGATCGAGTC CGGCCGCATC CAACTCGGGG TCCACGACCT GCGCGCGTGG ACCCACGATG TGCACCGTTC GGTCGACGAT GCGCCCTACG GCGGCGGGCC GGGGATGGTG ATGAAGGCGC CGGTGTGGGG TGCCGCACTC GACGACGTCT GCACCGACGA CACGCTGCTG GTGGTGCCGA CCCCGGCGGG GCGGCTCTTC GATCAGGCCA CCGCTGCGCG GTGGAGCACC GAACGGCATC TGGTGTTCGC CTGCGGGCGC TACGAGGGCA TCGATCAGCG GGTCGTCGAC GACGCCGCCC GGCGGATGCG TGTGGCGGAG GTCTCGATCG GCGATTACGT GCTCAACGGC GGCGAATCCG CGACGCTGGT GATGGTCGAG GCGGTCGTGC GGTTGCTGCC GGAGGTGCTC GGCAACCCCG CCTCACACGC CGACGACTCG CACTCCGCGG GCCTGCTCGA GGGGCCGAGT TACACGCGGC CGCCGAGTTG GCGCGGGCTG GACGTACCCG CCGTGCTGCT GTCCGGTGAT CACGCGAAGG TCGCGGCCTG GCGGCACGAG CAGGCGCTCA CCCGGACCCG GGACAGGCGC CCGGACCTGT TGGGCGACAA CTAG
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Protein sequence | MRIDVITIFP RYLDPLRESL PGKAIESGRI QLGVHDLRAW THDVHRSVDD APYGGGPGMV MKAPVWGAAL DDVCTDDTLL VVPTPAGRLF DQATAARWST ERHLVFACGR YEGIDQRVVD DAARRMRVAE VSIGDYVLNG GESATLVMVE AVVRLLPEVL GNPASHADDS HSAGLLEGPS YTRPPSWRGL DVPAVLLSGD HAKVAAWRHE QALTRTRDRR PDLLGDN
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