Gene Mjls_1947 details

Gene Information

• Locus tag: Mjls_1947
• Symbol: rimM
• ID: 4877669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. JLS
• Kingdom: Bacteria
• Replicon accession: NC_009077
• Strand: +
• Start bp: 2055262
• End bp: 2055783
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640139246
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001070226
• Protein GI: 126434535
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.638971
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACCTCG TAATCGGGCG GGTCGCCAAG GCGCACGGCG TCACCGGTGA ACTGGTCGTC 
GAGGTCCGCA CCGACGACCC CGACGCCCGG TTCGTGCCGG GCGCGCGGTT GCGCGGCCGG 
GCCCCCAGGG GTGGCGCCGA ACGTGCGTTC GTCGTCGAAT CCGTTCGCCC GCACGGCGGT 
CGGTTGCTGC TGCGCCTCGA CGGGGTGGCC GACCGGACCG CCGCCGACGC CCTGCGCGGG 
ACGGTGTTCC TCGTCGACAG CGCGGATCTG CCGCCCATCG AGGAGCCCGA CGAGTATTAC 
GACCACCAAC TCGAAGGGCT GCTCGTGCGG ACCGTCGACG GGGTGGACGT CGGCACGGTG 
GCCGAGGTGC TGCACACCGC GGCCGGCGAA CTGCTGTCGG TGAAGACGCC CGAGGGCGCC 
GAGATTCTCG TGCCGTTCGT CACCGCGATC GTGCCGCGGG TGTCACTGGC CGACGGCCTG 
GTGGAGATCG ATCCGCCCGA GGGTCTGCTG GACCTGGAGT GA 

 

Protein sequence

MDLVIGRVAK AHGVTGELVV EVRTDDPDAR FVPGARLRGR APRGGAERAF VVESVRPHGG 
RLLLRLDGVA DRTAADALRG TVFLVDSADL PPIEEPDEYY DHQLEGLLVR TVDGVDVGTV 
AEVLHTAAGE LLSVKTPEGA EILVPFVTAI VPRVSLADGL VEIDPPEGLL DLE