| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1942 |
|---|
| Symbol | |
|---|
| ID | 4877664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2052251 |
|---|
| End bp | 2053126 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640139241 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001070221 |
|---|
| Protein GI | 126434530 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0582886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAGGC TCGTCAGTCT GTTCGCAATC GTCCTGGCCG CACTCGGCGT CGTCGCCGCG
CCCGTCGCCG CCGCCGACAT CGACATCCAG CCGGTGGGGT CGGTACCGAT CCCCGCCGGT
CCGGCGGAGG CGTGGATCGT GGCGGACATG GACACCGGTC AGGTGCTGGC CGGCCGCAAC
GACACCACGC GTTACGCCCC CGCGAGCACG ATCAAGACAC TGCTGGCGCA GGTGGTGCTC
GACGAGGTGC CGCTGGACAC GACGATCGCC GCCGAGGAGG CCGACACCAG GGTGGAGTGC
AACTGCGCCG GGGTGGCGCC CGGCCACGTC TACACGGCCC GCCAACTGCT CGAGGCGCTG
CTGCTGGTGT CGGGCAATGA CGCCGCCAAC ACCCTGGCTC GCATGCTCGG CGGCATGGAC
TCCGCCGTGG CGAAGATGAA CGCCAAGGCC GCCCAACTGG GCGCCCACGG CACCAACGTG
GTGACTCCGT CCGGCCTGGA CGGACCCGGG ATGCCGTTCT GGTCCACCGC CCACGATCTG
GCGGTGATCT TCCGGGCGGC GATGGCCAAC CCGGTGTTCG TGCAGATCAC CGCGATGCCG
TCGACGGTCT TCCCGACCAA GGCCGGGGAG GCCGTCCTGG TCAACCAGAA CGAGCTGCTG
CACCGCTACC CCGGCGCCAT CGGCGGCAAG ACGGGGTTCA CCGACATCGC CCGCAAGACC
TTCGTCGGCG CGGCGCAGCG CGACGGCCGA CGGTTGGTGG TCGTGCTGAT GCACGGGCTG
GTCAAAGAGG GCGGCCCCAC CTACTGGGAT CAGGCGGCCG GCCTGCTCGA CTGGGGCTTC
GGGCTCGACC GCGGCGCGAG CGTCGGAACC CTGTAG
|
|---|
| Protein sequence | MGRLVSLFAI VLAALGVVAA PVAAADIDIQ PVGSVPIPAG PAEAWIVADM DTGQVLAGRN
DTTRYAPAST IKTLLAQVVL DEVPLDTTIA AEEADTRVEC NCAGVAPGHV YTARQLLEAL
LLVSGNDAAN TLARMLGGMD SAVAKMNAKA AQLGAHGTNV VTPSGLDGPG MPFWSTAHDL
AVIFRAAMAN PVFVQITAMP STVFPTKAGE AVLVNQNELL HRYPGAIGGK TGFTDIARKT
FVGAAQRDGR RLVVVLMHGL VKEGGPTYWD QAAGLLDWGF GLDRGASVGT L
|
|---|
| |