| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1861 |
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| Symbol | ligA |
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| ID | 4877583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 1965982 |
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| End bp | 1968087 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640139158 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_001070140 |
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| Protein GI | 126434449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0141215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.135266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGA AGTCGACCCC GGATGCCGGG CCGCAGGAGC AGGCCACCGA AGCCGAGGCC
GAACTGCGCC ACCGTTGGCA GGCGCTCGCC GACGAGGTCC GCGACCACCA GTTCCGGTAC
TACGTGCGCG ACGCCCCGGT CATCTCCGAC GCCGACTTCG ACAAGCTCTT CCAGCAACTC
GAAGCGCTGG AGGCCGAACA TCCCGAGCTG CGCGCCCCGG ATTCGCCGAC CCAACTGGTG
GGCGGCGCCG GGTTCGCCAC CGACTTCACC CCGGCCGAAC ATCTGGAGCG GATGCTGAGC
CTCGACGACG TCTTCAACGT CGACGAGCTG ACCGCCTGGT CGAGCCGGGT GCGCGCCGAG
GTCGGCGACG ATGCGGCGTA TCTGTGTGAG CTCAAGGTCG ACGGCCTGGC GCTGGCGCTG
GTGTATCGGG ACGGACGGCT GGAACGCGCC GCGACGCGCG GTGACGGCCG GGTCGGCGAG
GACGTCACGC TCAACGCCCG CACCCTCGAC GACGTGCCCG AACGGCTGAC CCCGTCCGAC
GAGTTCCCCC ACCCGGCGGT GCTGGAGGTC CGCGGTGAGG TGTTCTTCCG GGTCGCCGAC
TTCGAGGCGC TCAACGCGGG GCTGGTCGCC GAGGGGAAAC CGCCGTTCGC CAACCCGCGG
AACAGCGCCG CCGGCTCGTT GCGGCAGAAG AATCCGGCGG TCACGGCGCG CCGCCCGCTG
CGGATGGTGT GTCACGGGAT CGGCTACACG GAGGGGTTCA GTCCGACCAG CCTGCACGAG
GCGTACGGAG CGCTGCGGGC CTGGGGGCTG CCGGTGTCCG ACCACACCAC CCGGGTGCAG
GGTATGGACG CGGTGCGGGA GCGCATCGCG TACTGGGGCG AGCACCGTCA TGACATCGAA
CACGAGATCG ACGGTGTGGT CGTCAAACTC GACCAGATCG CTTTGCAGCG CCGGCTCGGG
GCGACCTCGC GCGCGCCACG GTGGGCGGTG GCCTACAAGT ATCCGCCCGA GGAGGCGCAG
ACCAAGCTGC TCGACATCCG GGTCAACGTC GGCCGCACCG GCCGCGTGAC GCCGTTCGCC
TACATGGAAC CGGTGAAGGT GGCCGGCTCC ACCGTGGGCC TGGCGACGCT GCACAACGCC
TCGGAGGTCA AACGCAAGGG TGTGCTCATC GGCGACACCG TGGTGATCCG CAAGGCCGGT
GACGTCATCC CCGAGGTGCT GGGGCCCGTC GTCGATCTGC GCGACGGCAC CGAACGCGAG
TTCGTGATGC CGACGCACTG CCCCGAATGC GGCACCGAAC TCGCCCCGGC CAAGGAGGGC
GACGCCGACA TCCGCTGCCC GAACTCGCGC ACGTGTCCGG CGCAGTTGCG GGAGCGGGTG
TTCCACGTCG CCGGGCGCGG CGCCTTCGAC ATCGAGGGTC TCGGGTACGA GGCGGCCATC
GCGCTGCTGC AGGCCGGTGT CATCACCGAC GAGGGCGACC TGTTCACGCT GACCGAGGAC
GACCTGCTGC GCACCGAGCT GTTCACCACG AAGGGTGGCG CCGTATCCGC CAACGGCCGC
CGGCTGCTGG CCAACCTCGG CAAGGCCAAG GCGCAGCCGC TGTGGCGGGT GCTGGTCGCG
TTGTCCATCC GCCATGTCGG GCCGACGGCG GCGCGGGCGC TGGCCACCGA ATTCGGCAGT
CTCGACGCGA TCATCGAGGC CTCCGAGGAC CAGCTCGCCG CGGTGGAGGG TGTGGGGCCG
ACGATCGCCG CCGCGGTCAA GGAGTGGTTC ACGGTCGACT GGCACTGCGC GATCGTCGAG
AAGTGGCGCG CCGCGGGGGT GCGGATGGCC GACGAACGCG ACGCCAGCAT CGCCCGCACG
CTGGAGGGGT TGTCGATCGT CGTCACAGGG TCGCTGGCCG GGTTCTCCCG CGACGAGGCG
AAGGAGGCGA TCATCGCCCG CGGGGGCAAG GCGGCCGGTT CGGTGTCGAA GAAGACCGCG
TACGTGGTCG CGGGCGACTC ACCGGGTTCC AAGTACGACA AGGCGATCGA TCTCGGTGTG
CCGGTGCTCG ACGAGGACGG ATTCCGGAAC CTGCTGGAGA ACGGGCCGCA GGCGCCGGAG
GGCTAG
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| Protein sequence | MSAKSTPDAG PQEQATEAEA ELRHRWQALA DEVRDHQFRY YVRDAPVISD ADFDKLFQQL
EALEAEHPEL RAPDSPTQLV GGAGFATDFT PAEHLERMLS LDDVFNVDEL TAWSSRVRAE
VGDDAAYLCE LKVDGLALAL VYRDGRLERA ATRGDGRVGE DVTLNARTLD DVPERLTPSD
EFPHPAVLEV RGEVFFRVAD FEALNAGLVA EGKPPFANPR NSAAGSLRQK NPAVTARRPL
RMVCHGIGYT EGFSPTSLHE AYGALRAWGL PVSDHTTRVQ GMDAVRERIA YWGEHRHDIE
HEIDGVVVKL DQIALQRRLG ATSRAPRWAV AYKYPPEEAQ TKLLDIRVNV GRTGRVTPFA
YMEPVKVAGS TVGLATLHNA SEVKRKGVLI GDTVVIRKAG DVIPEVLGPV VDLRDGTERE
FVMPTHCPEC GTELAPAKEG DADIRCPNSR TCPAQLRERV FHVAGRGAFD IEGLGYEAAI
ALLQAGVITD EGDLFTLTED DLLRTELFTT KGGAVSANGR RLLANLGKAK AQPLWRVLVA
LSIRHVGPTA ARALATEFGS LDAIIEASED QLAAVEGVGP TIAAAVKEWF TVDWHCAIVE
KWRAAGVRMA DERDASIART LEGLSIVVTG SLAGFSRDEA KEAIIARGGK AAGSVSKKTA
YVVAGDSPGS KYDKAIDLGV PVLDEDGFRN LLENGPQAPE G
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