| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1784 |
|---|
| Symbol | |
|---|
| ID | 4877507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 1886211 |
|---|
| End bp | 1886882 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640139082 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001070064 |
|---|
| Protein GI | 126434373 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.105843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGTT ACGGCCAGTT CTGCCCCGTG GCCAAGGCCA TGGAAGTGCT CGACGAACGC
TGGACGCTGC TGGTGGTCCG CGAATTGTTG CTCGGTAGTA CACATTTCAA CGAACTGCGC
CGTGGTGTGC CGAAGATGTC CCCGGCGCTG CTGTCGAAGC GGCTCAAGTC GCTGATCCGG
GCCGGTGTCG TCGAGCGCAG CGAAATCGAC GGTCGCACAA CATATTCGCT CACTCCCTGC
GGCAAAGAAC TGACCGCGGT GGTGGACGCG CTGGGCGCCT GGGGGGTGCG CTGGATCGGC
GAACTGGGCG AAGCCGACCT CGACCCGCAC CTGCTGATGT GGGACATGCG CAGGTCGATC
CCATTGACCG AATGGCCGGA CGGCCGCACC ACGCTGGCGT TCCGCCTCGA CGGAGTGGAG
GCGCGCGCGT CGCGCTGGTG GCTGGTGGTC GCCGACGGGC GGGCGGACGT CTGCGATTTC
GACCCCGGCT ACGAGGTGAC GGCGACAGTG TCGGCAGGCC TGCGGACGCT GACCGCGATC
TGGCGCGGCG ACATCAGTTG GCAGCGTGCT CTGCTCGACG GTGGCGTGTC GGTGTCGGGC
CCGGCAGAGG TCCGCCGCGC GGTGCCGGGC TGGATCGGTC AGGGTTCGCT GGCGGCGGTA
CCGCGGCCCT GA
|
|---|
| Protein sequence | MSGYGQFCPV AKAMEVLDER WTLLVVRELL LGSTHFNELR RGVPKMSPAL LSKRLKSLIR
AGVVERSEID GRTTYSLTPC GKELTAVVDA LGAWGVRWIG ELGEADLDPH LLMWDMRRSI
PLTEWPDGRT TLAFRLDGVE ARASRWWLVV ADGRADVCDF DPGYEVTATV SAGLRTLTAI
WRGDISWQRA LLDGGVSVSG PAEVRRAVPG WIGQGSLAAV PRP
|
|---|
| |