| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1717 |
|---|
| Symbol | |
|---|
| ID | 4877441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1810288 |
|---|
| End bp | 1812669 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640139016 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001069998 |
|---|
| Protein GI | 126434307 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.778386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAA AGACGGGTAA GCACGCCGCC GACACCCACG ACGTCATCCG CGTGGTCGGC
GCGCGGGAGA ACAACCTCAA GAACATCGAC GTCGAACTGC CGAAACGGCG GCTGACCGTG
TTCACCGGGG TGTCGGGATC GGGTAAGAGC TCGTTGGTGT TCGGCACCAT CGCCGCGGAA
TCCCAGCGTC TGATCAACGA GACGTACAGT GCGTTCCTGC AGGGCTTCAT GCCGTCGATG
TCGCGGCCGG ACGTGGACGT CCTCGAAGGG CTGACGACGG CGATCATCGT CGACCAGGAG
CGGATGGGCG CCAACCCGCG CTCGACGGTC GGCACGGCGA CCGACGCCCA TGCCATGCTG
CGGATCCTCT TCAGCCGCCT CGGTGAGCCG CACATCGGTT CACCGCAGGC GTTCTCGTTC
AACGTCGCCT CCGTCAGCGG GGCCGGCGCG GTGACGTTCG ACAAGGGCGG CAGGACCGTC
AAGGAGAGGC GCGAGTTCTC GATCACCGGC GGGATGTGTC CACGGTGCGA GGGCCGCGGG
TCGGTGTCCG ACATCGACCT CACCGCGCTC TACGACGACT CCAAATCCCT CAACGAGGGC
GCGCTGAGCA TCCCCGGCTA CAGCATGGAG GGTTGGTACG GCCGAATCTT CCGTGGCTGT
GGGTATTTCG ACCCCGACAA ACCGATCCGC AAGTACACCA AGAAGGAACT CAACGACCTC
CTGTACCGCG AGGCCACGAA GATCAAGGTC GACGGGGTCA ACCTCACCTA CGCCGGACTG
ATCCCCACGA TCCAGAAATC GTTCCTGTCC AAGGACGTCG ACGCGATGCA ACCCCACATC
CGCGCATTCG TCGAACGGGC GGTGACGTTC GCGACCTGCC CCGAGTGCGA GGGCACGCGC
CTGACCGAAC AGGCACGGTC GTCGAAGATC AAGGGCTGCA GCATCGCCGA CGTGTGCGCG
ATGCAGATCA GCGACCTCGC CGAGTGGATC CGCGGACTCG ACGAAGCCTC CGTCCGTCCC
CTGCTGGACG GTTTGGGCCA CCTTCTGGAT TCGTTCACCG AGATCGGCCT GGGCTACCTC
TCGCTGGACC GTCCCGCAGG CACGCTGTCC GGGGGAGAAG CTCAGCGCAC GAAGATGATC
CGCCACCTCG GCTCGTCACT GACCGACGTC ACCTACGTCT TCGACGAGCC CACCATCGGC
CTGCATCCCC ACGACATCGA ACGGATGAAC ACGCTGCTGC TGCGCCTGCG GGACAAGGGC
AACACGGTGC TCGTCGTCGA GCACAAACCC GAGACGATCG TCATCGCCGA CCGCGTCGTG
GACCTCGGAC CCGGTGCGGG TACCGGTGGC GGCGAGGTGG TCTTCGAGGG CCCCGTCGCC
CAGCTCCGTC GCAGCGGCAC GCTCACCGGA CGTCACCTCG ACGACCGGGC GGCCATGAAG
AAGTCTGTGC GCCAAGCACA AGGCGCCCTG GAGATCCGCG GTGCCACGAC GAACAACCTG
CGTGACGTCG ACGTCGACAT CCCGCTCGGT GTCCTCACGG TGCTCACCGG TGTCGCGGGG
TCGGGGAAGA GCTCGCTCAT CGACGGTTCG GTGGCCGGCC GCGACGAGGT CGTCTCGATC
GATCAGGGCG CGATCCGAGG TTCCCGGCGA AGCAACCCCG CCACCTATAC CGGCCTGCTC
GACTCCATCC GCAAGGCGTT CGCCAAGGCC AACGGCGTGA AGCCGGCGCT GTTCAGTTCC
AACTCCGAAG GCGCCTGCCC GGCCTGCAAG GGCGCCGGTG TCATCTACAC CGAACTCGGC
GTCATGGCGA CCGTGGAATC ACCGTGCGAG GAATGTGAGG GACGACGGTT CCAGGCCTCG
GTCCTCGAGT ACACGCTCGG CGGCCGGAAC ATCGCCGACG TGCTCGAGAT GTCGGTGGCG
GACGCGCTCG GCTTCTTCGC GGACGGCGAG GCCGCGACCC CGGCCGCGCA CAAGGTGCTC
GACCGTCTCG CCGATGTGGG GCTCGGATAC CTCAGCCTCG GTCAGCCGCT CACCACACTC
TCCGGGGGCG AACGGCAGCG CCTCAAGCTG GCCACCCGGC TGGGGGACAC CGGTGCCGAC
AAGAAGGACG TCTACGTACT CGACGAGCCG ACCTCGGGTC TGCACCTCGC CGACGTCGAG
CAGCTGCTCG CCCTGCTCGA CCGGCTGGTC GACTCCGGCA AGTCGGTCAT CGTGATCGAG
CACCACCAGG CCGTGATGGC GCACGCGGAC TGGATCATCG ACCTCGGTCC CGGCGCCGGC
CACGACGGGG GCCGGATCGT CTTCGAGGGA CCTCCGGCAG ACCTCGTGGC CAGCCGGGCG
ACCCTCACCG GTGAGCATCT CGCCGACTAC GTCGGCGGCT GA
|
|---|
| Protein sequence | MAGKTGKHAA DTHDVIRVVG ARENNLKNID VELPKRRLTV FTGVSGSGKS SLVFGTIAAE
SQRLINETYS AFLQGFMPSM SRPDVDVLEG LTTAIIVDQE RMGANPRSTV GTATDAHAML
RILFSRLGEP HIGSPQAFSF NVASVSGAGA VTFDKGGRTV KERREFSITG GMCPRCEGRG
SVSDIDLTAL YDDSKSLNEG ALSIPGYSME GWYGRIFRGC GYFDPDKPIR KYTKKELNDL
LYREATKIKV DGVNLTYAGL IPTIQKSFLS KDVDAMQPHI RAFVERAVTF ATCPECEGTR
LTEQARSSKI KGCSIADVCA MQISDLAEWI RGLDEASVRP LLDGLGHLLD SFTEIGLGYL
SLDRPAGTLS GGEAQRTKMI RHLGSSLTDV TYVFDEPTIG LHPHDIERMN TLLLRLRDKG
NTVLVVEHKP ETIVIADRVV DLGPGAGTGG GEVVFEGPVA QLRRSGTLTG RHLDDRAAMK
KSVRQAQGAL EIRGATTNNL RDVDVDIPLG VLTVLTGVAG SGKSSLIDGS VAGRDEVVSI
DQGAIRGSRR SNPATYTGLL DSIRKAFAKA NGVKPALFSS NSEGACPACK GAGVIYTELG
VMATVESPCE ECEGRRFQAS VLEYTLGGRN IADVLEMSVA DALGFFADGE AATPAAHKVL
DRLADVGLGY LSLGQPLTTL SGGERQRLKL ATRLGDTGAD KKDVYVLDEP TSGLHLADVE
QLLALLDRLV DSGKSVIVIE HHQAVMAHAD WIIDLGPGAG HDGGRIVFEG PPADLVASRA
TLTGEHLADY VGG
|
|---|
| |