Gene Mjls_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1676 
Symbol 
ID4877400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1774725 
End bp1775522 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID640138974 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_001069957 
Protein GI126434266 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAACGT CGATCGACAG CAATCCCGAC GGCGCCGTAG CGAGCCAGTC GGAGATCAGC 
GCGGAGATCG GTGCGATCGA GTCCGCCTAC CAGCGTGCAG GGGTCGAGGA GACGCAGCCG
CGCCTGAGTT ATCCGCCTTA CCGGAGCAGC CTGCTACGGC ATCCGACAAA GGACCTTCAC
CACGCCGACC CGGAAGGGGT CGAGCTATGG ACGCCGTGCT TCTCCGAACG CGACGTTCAC
CCGCTGGAGG CCGACCTCAC CGTCCAGCAC TCGGGTGAAC CCATCGGTGA ACGACTGGTG
GTGACCGGCA GGGTCGTCGA CGGCGCAGGG CGGCCGGTGC GGCGCCAGCT CGTCGAGATT
TGGCAGGCCA ACGCCGGCGG ACGTTACATC CACAAGGGGG ATCAGCACCC GTCCCCAATC
GACCCCAACT TCACCGGCGC CGGCCGCTGT TTGACCGACG AGGACGGCAT CTACCGGTTC
ACCACGATCA AGCCGGGGCC GTATCCGTGG AAGAACCACC GCAACGCGTG GCGGCCCGCA
CACATCCACT TCTCGCTCTT CGGCACGGAA TTCACGCAGC GAATGGTCAC CCAGATGTAC
TTCCCGGGTG ACCCGCTCCT CTGCCTTGAT CCGATCTTCC AGGCGATCCC GGATCAGAAG
GCGCGCAGCC GGCTGGTGGC CAGCTACGAT CACGAACTCA GCACCCACGA ATGGGCTACC
GGCTACCGAT GGGACGTCGT CCTGACCGGG TCGGCGCGCA CCCCAATCGA GAACCTCGGC
CGCGGAGCCC ACCGCTGA
 
Protein sequence
MTTSIDSNPD GAVASQSEIS AEIGAIESAY QRAGVEETQP RLSYPPYRSS LLRHPTKDLH 
HADPEGVELW TPCFSERDVH PLEADLTVQH SGEPIGERLV VTGRVVDGAG RPVRRQLVEI
WQANAGGRYI HKGDQHPSPI DPNFTGAGRC LTDEDGIYRF TTIKPGPYPW KNHRNAWRPA
HIHFSLFGTE FTQRMVTQMY FPGDPLLCLD PIFQAIPDQK ARSRLVASYD HELSTHEWAT
GYRWDVVLTG SARTPIENLG RGAHR