Gene Mjls_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1642 
Symbol 
ID4877369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1745433 
End bp1746686 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID640138943 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001069926 
Protein GI126434235 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCGA ATATGGAGAG TCTGTTCGAC GGTCTGACGA TCCTCGAGCT GGGGCACGTG 
ATCGCGGCGC CTTTCGCTGC CTCGCTGATC GGCGACTTCG GAGCACAGGT CATCAAGATC
GAAGACCCCG GCTCGGGGGA CATGTTGCGT AGGTCCGGTC CTCGTAAAGA CGGAGTGCCC
CTCTGGTGGA AGTCCGCGGC CCGGAACAAG TCAAGCGTCG CTGTCGATCT GCGGCTCGCC
GAAGGGCAAG CGCTGGTGCG CAAAATGGTC GAACGCGCCG ACGTGGTGAT CGAAAACTTC
CGCCCGGGAA CGCTTGAGCG CTGGGGACTG GGATGGGAGG AGCTGCACGC AGCGAACCCG
CGGCTGATCA TGTTGCGGAT TTCCGGGTAC GGCCAGATCG GCCCGGAGAG CGCAAAGCCG
GGATATGGAC GCGTCGGCGA GGCCATGAGC GGAGCGGTAC ACATCACCGG GCATCCTGAC
CGGCCACCGA CGCATTTCGG TTTCTCCCTC GGCGATGTCA CGACAGGAAT CATGGGTGCA
TTCGCTGTTG CCGGAGCACT GTTCAAACGC GAAGCGATCG GGGATCGCTT CGATGGGGAA
TGTATCGACC TGGCTCTCTA CGAATCACTG TTCCGTGGTA TCGACTGGCA GGTCATCCTT
TATGACCAGT TGAACTTTGT TGCCGAGCGT CAGGGCAATC AGTTCCAGGT CAGCCCGTCA
CCGGTGTCAG ACACGTATCT CAGTGGCGAT GGGGTGTGGT ACACCGTGGC GACCGGCACC
GTTCGGTCAG TGCAGAGCCT GCTCGAACTG CTGGGCGGCA CGACTCTGCG TAACGATCCG
AAGTACGCGA CACAGGAACT GCAGATGTTG CACCGCGAGG AGCTCGGCGA GATGGTTCGC
CAGTGGTTCG CCGAAAACAA CTCCGATATC GTCGAAAAGG CCTGCGCGAG CTCCGGTGTC
GTGGCTGCGC GGATCTTCAC GCCGGCAGAG ATGTTCTCCA GTCCCACGTT CGCGGCTCGC
CAGAGCCTGG TCGAGGTCGC CGACCAGGAA TTGGGTCCGG TCCGTGTCAC CGGGGTGGTA
CCAAGGCTGA CGAACTTTCC CGGATCCGTG CGCAGCACTG GGCCCGGTCT CGGGATCCAC
GGCCAAGAGG TGCTGACCGA GTGGCTCGGC ATGGCCGACT CGGAGTACGA GGCGCTGGTA
TCGAGTGGCG TCGTCGGGGC GGTCGACGTT GACGGAGAGG TTCCCGGGCA TTGA
 
Protein sequence
MSANMESLFD GLTILELGHV IAAPFAASLI GDFGAQVIKI EDPGSGDMLR RSGPRKDGVP 
LWWKSAARNK SSVAVDLRLA EGQALVRKMV ERADVVIENF RPGTLERWGL GWEELHAANP
RLIMLRISGY GQIGPESAKP GYGRVGEAMS GAVHITGHPD RPPTHFGFSL GDVTTGIMGA
FAVAGALFKR EAIGDRFDGE CIDLALYESL FRGIDWQVIL YDQLNFVAER QGNQFQVSPS
PVSDTYLSGD GVWYTVATGT VRSVQSLLEL LGGTTLRNDP KYATQELQML HREELGEMVR
QWFAENNSDI VEKACASSGV VAARIFTPAE MFSSPTFAAR QSLVEVADQE LGPVRVTGVV
PRLTNFPGSV RSTGPGLGIH GQEVLTEWLG MADSEYEALV SSGVVGAVDV DGEVPGH