Gene Mjls_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1630 
Symbol 
ID4877357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1731771 
End bp1733117 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content64% 
IMG OID640138931 
Productvirulence factor Mce family protein 
Protein accessionYP_001069914 
Protein GI126434223 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CTCGGACCAA ACTCGGATTG GCAATCATTT TGGTCAGCCT CGTCGTGGGC 
GGCGCGATTG CGGTGACACG CGCGGCACAC GAGCTCGATC GTGTTCACGT CGTCGCCTAC
TTCGACAACA GCAACGGTGT GTTCGTCGGC GACGACGTCC GCATCAAGGG CGTCCGCGTC
GGCAGGATCG AGGCCATCGA ACCGCAACCC ACACAGGTCA GAATCACCTT CTGGTTCGAC
GCGAAATACC CGGTGCCCGC CGACGCCAAA GCCGTGATCT TATCCCCGAC ACTGGTCACG
TCCCGCGCCA TCCAATTAAC CCCGGGCTAC ACTGGTGGCC CGACGCTGCA GAACAACGCG
ACCATCCCCC GGGCGCGCAC CGCTGTTCCG GTGGAGTTCG ACGAATTCCG CCAACAGCTC
GAACGGCTGA CCGCTTTGCT GCAGCCCACC GAGCCGGGCG AAGTGAGCAC GCTGGGCTCC
CTGGTGAACA CCGCCGCCGA CAACTTGCGC GGTCAGGGTC CGGCGATCCG CGACGCCATC
ATCAGGCTGT CCCAATCGGT GTCCGCGCTC GCCGATCACA GCCCGGACAT CTTCACCAGC
GTCAGAAACC TGTCGACACT GGTCTCGGCG CTGCAGGACA GCACCGTCCT GATACGTCAG
CTGAATCAGA ACCTTGCGTC GGTCACCGGG CTTTTGGCCA ACGAGCCCAC CGAAGTCGGG
GACGCGGTGA AAAACCTCAA TGACGTGGTG GGCGAGGTGA CCGCGTTCGT CGCCGCAAAC
CGCGACACGA TCGGCGCCAC CTCGGACAAG TTGACGTCGG TTTCACAGGC GCTGACAGAC
AGCACCGACG ACATCGAACA GCTGCTGCAC ATCGCGCCGA CGACGCTGTC TAACGCCGCC
AACCTCTACC AGTCCGCCCA GGGCACGCTC ACCGGAGCTC TTAATGTCGC CAACTTCTCC
GATCCGATCA CCTTTTTGTG CGGCGCAGTG CAGGCCGCCT CGCGACTGAA CAACGAGCAG
TCGGCGAAAT TATGTGTGCA GTACTTGGCG CCGATCATCA AGAACCGCCA ATACAACTTC
CCGCCGATCG GGGTCAACCC CTTCGTCGGT GCGACTGTTC GACCGAATGA AGTCACCTAC
AGCGAGGATT GGATGCGCCC GGACTACGTT CCGCCGCAGC CGACGCTGCC GGCCGCGACC
GGCGCCGACC CGGACGCGCC GCCACCGCTT ACCGGGCCGA CGCTGCCCGC CGAAGCTCCG
GTGCCGATGC CGGACCCGTC GAATCGGCAG ACCGATCCGG CCGCCGGGTT GCCCGGCATG
ATGATTCCGC ACGGGGGCGG TTCATGA
 
Protein sequence
MTNSRTKLGL AIILVSLVVG GAIAVTRAAH ELDRVHVVAY FDNSNGVFVG DDVRIKGVRV 
GRIEAIEPQP TQVRITFWFD AKYPVPADAK AVILSPTLVT SRAIQLTPGY TGGPTLQNNA
TIPRARTAVP VEFDEFRQQL ERLTALLQPT EPGEVSTLGS LVNTAADNLR GQGPAIRDAI
IRLSQSVSAL ADHSPDIFTS VRNLSTLVSA LQDSTVLIRQ LNQNLASVTG LLANEPTEVG
DAVKNLNDVV GEVTAFVAAN RDTIGATSDK LTSVSQALTD STDDIEQLLH IAPTTLSNAA
NLYQSAQGTL TGALNVANFS DPITFLCGAV QAASRLNNEQ SAKLCVQYLA PIIKNRQYNF
PPIGVNPFVG ATVRPNEVTY SEDWMRPDYV PPQPTLPAAT GADPDAPPPL TGPTLPAEAP
VPMPDPSNRQ TDPAAGLPGM MIPHGGGS