Gene Mjls_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1624 
Symbol 
ID4877351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1725683 
End bp1726201 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID640138925 
Productintradiol ring-cleavage dioxygenase 
Protein accessionYP_001069908 
Protein GI126434217 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTT CTCCACGGTG GCAGTGCGAC CGGGCGGCGG GCGCGTCCGG GGCCATTCAG 
TTTCACGGGG TGATTACGGA TGAAGATGGT CGACCAGTTC CTAACGTCCT GATCGAGACC
TGGCACGCCG CGGGGGACGA CGACAACGCG GCGACGAAGA TCGGACGGCC GCGGTGCGAC
GGCCGGAACT ACACCCGCCC AAAGAGCGTC ATCACCGACC AACAGGGTCG TTACAGCATG
AGAATGGTGC CGCCTCGAGC ACCCGAGCAC GGGGCAGCGC CGTTCATTGC GGTGTCGGTG
CATGCTCGAG GGCTTCTCGA TCGGCTGATA ACCCGCGCCT ACCTTCCAGG GTGCCATCTC
GCCAAGGACC CCCTGCTCCG CCGCCTGCCC GCCGAGCGGC GGCAAGCCCT GATTGCCACC
CGCGACGACA TCGGACTTCG TTTCGACATC ACGCTGCGGC CAGCACACGG CGTGAGGGTT
GAAACCTTTG TTGAGCCGCA ACAGGAAGCT GCGACGTGA
 
Protein sequence
MAASPRWQCD RAAGASGAIQ FHGVITDEDG RPVPNVLIET WHAAGDDDNA ATKIGRPRCD 
GRNYTRPKSV ITDQQGRYSM RMVPPRAPEH GAAPFIAVSV HARGLLDRLI TRAYLPGCHL
AKDPLLRRLP AERRQALIAT RDDIGLRFDI TLRPAHGVRV ETFVEPQQEA AT