Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1586 |
Symbol | |
ID | 4877318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1688710 |
End bp | 1691055 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640138891 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001069875 |
Protein GI | 126434184 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTGGC GTGGCATCAT GGGGTGGTTG CCAGCAAACT GCGGGGGGTC TGTGTCGGTC AAGAGTGCGC AGTGGCGGCT GATGGTATTT GCTGTCGTCG CGGTCCTGGC GTGGGTGAAC GCGCTGGCAA TTTTCGGCGA CGATGTCGCG CGGCGGGTGG CGGTGGTGCT GCAGGCGACG GCGGGCGTAT CGGCGCTGGT CGCCGCGGTG CTGGTGGCGC GGAAGTCAGC CGGGGTCGCG CGGTGGTGGC GCTTGCTCGT GATCGCGGCG ATGGGCAGTT GGCTGGTCGC CGAGATGGTG TGGTTCTTCG GTGGTGCCGG CCGCGGCGGT GACGAGGCTC ATCCGGTAGC TGTCGTCGCC TACTTCCTGC CGCCGGTGCT GTCCCTGGCC GCGATGGTCG TTCTCGCCCG CGGCGGCGGT GGGTTGCGCG GCCGCCACAG CGGATTGCGT CATTCGCGGG TCGTCGCGGT GCTCGACGGG TTGGTGGCGG CGTCGGCCTT CTCGATCCTG GCGTTCATCG CCGGTCTCGG CGCGATGACG GGTGCCGCGC TGCCCCGTTC CCAGAGCGTG CCCGTCGTGG TCGCCTACTC GCTGCTGGAA GTGGTCGTCG TGGTGGTCGC GGCGCTGATG GCGATGGCGT ACCGGCGCGA CCGGCCCGAT CGCGTGAACT ACCTGCTCCT CTCGGGCGGG GTGCTGACGA TCGCGGCGTC GGATCGGTTG ATCGCCTATC TGCGCACCGT CGGTGCGGAG TCGGGCGACC TGTGGGCCGG TGTCGGCTTC ACTCTGGGGC CGCTCATCAT CGCGTTCGCG GTGCTGGAAG TACGACCGAA GCCAGTGACC GGCCGCGGTG AGGACGCGAT GGACTGGTTG CAGGCGTTCC TGCCCTACAT CGGGTTCCTG TGCATCATCG GGTTGCTGTC CTACCACCTG CTGATCGGCC GGGATATGCC CAAGCTGGTG ATCGCGGTGG CGGTGGTGAT GATCGCGCTC GTCACCGCGC GACAGGTGGT CGCGATGCGG GCCCAGCGAC TGGTGACCAA CCAGCTCTAC GAGGCGCAAC GCCGGCTCGC ACACCAGGTG CACCACGACC CGCTCACCGG ACTGCCCAAC CGGGTGTTGT TCGCCAAACG GCTCGACGAG GCCATGCACG ACGGGAAGTT CGTGCTGATC TTCGTCGACA TCGACGACTT CAAAGAGGTC AACGACCAGT TCGGCCATGC GGCGGGCGAC GATCTGCTCT GCGCGGTGGG CGAGCGGCTG CGCCGGTGCG TCGGACCGTC GGACACTCTG GCCCGCATCG GCGGCGACGA GTTCGCGATC CTGGTCGAGG GCGAACACGA TGCGCCCGAG GTCGTCGCCG ACAAGCTGCG GGTGGCGCTG CGGGATCCGT TCGCGGTGCA CGGCTCGTCG GTGCGCGTGC GCGCGAGTAT GGGACTGGTC CGGCCCTCGG TCGACGAACC GAACCCGACA TCGGACGATC TGCTGCGCCA AGCCGACATC TCGATGTACG CAGGCAAGCG ACTGGGCAAG GACACCGCGG TGGTCTACCG GCCGTCCTCG GGTGTCTCGG TCGACTTCCC CAGTGCGCTA CGGCAGGCGG ACGGCGGGGT GCCGAAGGGG TTTACCCTGG CGTATCAGCC GGTGGTCACC CTTCCGCACG CTGCGCCGGT CGCTGTCGAA GCGTTGGCGA GATGGACCGC GCCGAATGGG ATGCAGATCT CGCCGGAGAC CTTCGTCGCG GTAGCGGAAG GCGCCGGTCT GGGTGGGGCG CTCGACGCGA TGGTGCTGGA CCTGGCGTGT CGCGAGATGG AGGCGGCCGG ACTCGACGTC GCCCTGCACG TCAACATCGG CGCGGCGCGG CTGGGCAACC GCGGATTCGA ACAGCAGGTG GTGCGGACAC TCGAGCGGCA CGGCATCGAA CCGGAGCGGC TGGTCCTCGA GATCACCGAG ACCGTCCCGA TCGTCGACCT GGCGAAGGGT GCGGCGGCCA TCCGGCGGCT GCGCTCGTTC GGCGTGCAGG TCGCGCTGGA CGATTTCGGC GCGGGCTTCA ACTCGCTCAA CTATTTGCAC GCACTGCCGA TCGACGTGGT GAAACTGGAC CGCAGCCTCG TCGTCGGCGG CGAACCCGAC CGCGACGTGG CGCTCTACCG GTCGGTGATC GGGCTGTGCG ATGCGCTGGG ACTCGACGTG ATCGCCGAGG GGATCGAGTA TCCCGAGCAG GCCGATACGG TGTTCGCCGC GGGATGCCGG ATGGCCCAGG GGCACCTGTT CGGACGCGCG GTGCCGCTGA GCGAACTCGG CCGGGTGCTG TCCGCCGCGT GGGAAGAGGC CGTTCCCCGC CCGTGA
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Protein sequence | MCWRGIMGWL PANCGGSVSV KSAQWRLMVF AVVAVLAWVN ALAIFGDDVA RRVAVVLQAT AGVSALVAAV LVARKSAGVA RWWRLLVIAA MGSWLVAEMV WFFGGAGRGG DEAHPVAVVA YFLPPVLSLA AMVVLARGGG GLRGRHSGLR HSRVVAVLDG LVAASAFSIL AFIAGLGAMT GAALPRSQSV PVVVAYSLLE VVVVVVAALM AMAYRRDRPD RVNYLLLSGG VLTIAASDRL IAYLRTVGAE SGDLWAGVGF TLGPLIIAFA VLEVRPKPVT GRGEDAMDWL QAFLPYIGFL CIIGLLSYHL LIGRDMPKLV IAVAVVMIAL VTARQVVAMR AQRLVTNQLY EAQRRLAHQV HHDPLTGLPN RVLFAKRLDE AMHDGKFVLI FVDIDDFKEV NDQFGHAAGD DLLCAVGERL RRCVGPSDTL ARIGGDEFAI LVEGEHDAPE VVADKLRVAL RDPFAVHGSS VRVRASMGLV RPSVDEPNPT SDDLLRQADI SMYAGKRLGK DTAVVYRPSS GVSVDFPSAL RQADGGVPKG FTLAYQPVVT LPHAAPVAVE ALARWTAPNG MQISPETFVA VAEGAGLGGA LDAMVLDLAC REMEAAGLDV ALHVNIGAAR LGNRGFEQQV VRTLERHGIE PERLVLEITE TVPIVDLAKG AAAIRRLRSF GVQVALDDFG AGFNSLNYLH ALPIDVVKLD RSLVVGGEPD RDVALYRSVI GLCDALGLDV IAEGIEYPEQ ADTVFAAGCR MAQGHLFGRA VPLSELGRVL SAAWEEAVPR P
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