Gene Mjls_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1579 
SymbolprfB 
ID4877311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1683130 
End bp1684245 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID640138884 
Productpeptide chain release factor 2 
Protein accessionYP_001069868 
Protein GI126434177 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCTG ACCGTCAAGC CGATATCGCC GCCCTCGCCG CCACCCTCAC GACGGTGGAG 
CGGGTGCTCG ACGTCGACGG TTTGCGGGAC CGCATCCAGA AGCTCGAACA AGAGGCCTCC
GATCCGAATC TCTGGGACGA CCAGAGCCGC GCCCAGAAGG TCACCAGCGA GCTCTCGCAC
GCCCAGAATG AGCTGCGGCG CGTCGAGGAA CTGCGGCAGC GCGTGGAAGA CCTCCCGGTG
CTCTACGAGA TGGCCGCGGA GGAAGAGGGG CAGGACGCCG AGAACGCCGG TGCCGAGGCG
GACGCCGAAC TGGCCAAGCT GCGCGTGGAC ATCGAGGCGA TGGAAGTCCG CACCCTGCTC
TCCGGCGAAT ACGACGAGCG CGAGGCCGTC GTCACCATCC GGTCCGGCGC AGGCGGTGTG
GACGCCGCCG ACTGGGCCGA GATGCTGATG CGGATGTACA TCCGCTGGGC CGAGCAGCAC
GACTACCCGG TCGAGGTGTT CGACACCTCC TACGCCGAAG AGGCCGGCAT CAAGAGCGCC
ACCTTCGCGG TGCACGCCCC GTACGCCTAC GGCACCCTTT CGGTGGAGCA GGGCACCCAC
CGTTTGGTGC GCATCAGCCC GTTCGACAAC CAGAGCCGGC GTCAGACGTC GTTCGCCGAC
GTCGAGGTGC TTCCGGTGGT CGAGACCACC GACCACATCG ATGTCCCCGA AACCGACCTG
CGCGTCGACG TGTACCGCTC CAGCGGGCCG GGCGGGCAGT CGGTGAACAC CACCGACTCG
GCGGTCCGGC TGACCCACAT CCCGACAGGG ATCGTGGTCA CCTGCCAGAA CGAGAAATCC
CAGCTGCAGA ACAAGGTCGC GGCGATGCGG GTGTTGCAGG CGAAGTTGCT GGCGCGCAAG
AAGCAAGAGG AACGTGCCGC GCTCGACGCG CTCAAGGGCG ACGGCGGGAG TTCGTGGGGT
AACCAGATGC GGTCCTACGT GCTGCACCCC TATCAGATGG TCAAGGACCT GCGCACCGAG
TACGAGGTCG GCAATCCGAG CGCGGTGCTC GACGGCGACA TCGACGGGTT CCTCGAAGCG
GGGATCCGCT GGCGGAACCG GCGCGATGAC GACTAG
 
Protein sequence
MDPDRQADIA ALAATLTTVE RVLDVDGLRD RIQKLEQEAS DPNLWDDQSR AQKVTSELSH 
AQNELRRVEE LRQRVEDLPV LYEMAAEEEG QDAENAGAEA DAELAKLRVD IEAMEVRTLL
SGEYDEREAV VTIRSGAGGV DAADWAEMLM RMYIRWAEQH DYPVEVFDTS YAEEAGIKSA
TFAVHAPYAY GTLSVEQGTH RLVRISPFDN QSRRQTSFAD VEVLPVVETT DHIDVPETDL
RVDVYRSSGP GGQSVNTTDS AVRLTHIPTG IVVTCQNEKS QLQNKVAAMR VLQAKLLARK
KQEERAALDA LKGDGGSSWG NQMRSYVLHP YQMVKDLRTE YEVGNPSAVL DGDIDGFLEA
GIRWRNRRDD D