Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1558 |
Symbol | |
ID | 4877290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 1663171 |
End bp | 1664076 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640138863 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_001069847 |
Protein GI | 126434156 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.953041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACT TGCCCGCCAA GGTCGACATC CGTGAGGTCT CGCTGCGCGA CGGCCTGCAG ATCGAACAGC CGATTCCCCT GTCGGCCAAG CTCGAACTGC TCGAAGCGGT GGTGGCCACC GGTGTGCGTG AGGTCGAGGC CACCGCCTTC GTCTCGCCGT CGAAGGTGCC CGCACTCGCC GACGCGGCCG CACTCGCCGC CGAACTCGGC CGATTCGACC AGGTCGAGTT CTCGGCGCTG GTGGCCAGTT CGAACGGGGC CAAGCGGGCG ATCGCGGCGG GGCTGCGCTC GATCGAGTAC GTGGTGTCGG CCGCCGACTC GCACAGCCGC GCCAACGTCG GGCGGTCCAG CATGGAGTCG GTCGCGGCCA TCCCCGACAT CGTCGCGATC GCCCACGACA GCGGCGCCAC CGTCGAGGTG ATCATCGCGA CCGCGTGGGA CTGTCCGTTC GACGGTCCGA CGCCACCGCA GCGTGTGGTC GAGATCGTCG ACGCCGCAGT GGGATTCGGT GTCGACCGGT TGGCGATCGC CGACACCATC GGCACCGCCA CCCCCCGCCG GGTCAGCGAC CTCGTCACGC AGGTGCGTCC CCGCATCGGC GACCTGCCGC TGGGCGCCCA TTTCCACAAC ACCCGTGGTG CGGGGCTGGC CAGCGCGTAC GCCGCGGTCC AGGCCGGGAT CACCCGGCTC GACTCCTCGG TCGGCGGGCT GGGCGGCTGC CCCTTCGCAC CGGGTGCGAG CGGCAACATC GCCACCGAGG ATCTCGTCTA CCTGTTGCGC GACAGCGGGA TCAACTGCGA CGTCGACCTG CAGGGGGCCA TCGCCGCCGC CGAGGTCGCC CGCACGGTCG TCGGCCACGA CCTGCCCAGT GCGCTGCTGC GCGCCGGCGA CCGGATCATC GGCTGA
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Protein sequence | MSDLPAKVDI REVSLRDGLQ IEQPIPLSAK LELLEAVVAT GVREVEATAF VSPSKVPALA DAAALAAELG RFDQVEFSAL VASSNGAKRA IAAGLRSIEY VVSAADSHSR ANVGRSSMES VAAIPDIVAI AHDSGATVEV IIATAWDCPF DGPTPPQRVV EIVDAAVGFG VDRLAIADTI GTATPRRVSD LVTQVRPRIG DLPLGAHFHN TRGAGLASAY AAVQAGITRL DSSVGGLGGC PFAPGASGNI ATEDLVYLLR DSGINCDVDL QGAIAAAEVA RTVVGHDLPS ALLRAGDRII G
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