Gene Mjls_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1558 
Symbol 
ID4877290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1663171 
End bp1664076 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID640138863 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_001069847 
Protein GI126434156 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.953041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACT TGCCCGCCAA GGTCGACATC CGTGAGGTCT CGCTGCGCGA CGGCCTGCAG 
ATCGAACAGC CGATTCCCCT GTCGGCCAAG CTCGAACTGC TCGAAGCGGT GGTGGCCACC
GGTGTGCGTG AGGTCGAGGC CACCGCCTTC GTCTCGCCGT CGAAGGTGCC CGCACTCGCC
GACGCGGCCG CACTCGCCGC CGAACTCGGC CGATTCGACC AGGTCGAGTT CTCGGCGCTG
GTGGCCAGTT CGAACGGGGC CAAGCGGGCG ATCGCGGCGG GGCTGCGCTC GATCGAGTAC
GTGGTGTCGG CCGCCGACTC GCACAGCCGC GCCAACGTCG GGCGGTCCAG CATGGAGTCG
GTCGCGGCCA TCCCCGACAT CGTCGCGATC GCCCACGACA GCGGCGCCAC CGTCGAGGTG
ATCATCGCGA CCGCGTGGGA CTGTCCGTTC GACGGTCCGA CGCCACCGCA GCGTGTGGTC
GAGATCGTCG ACGCCGCAGT GGGATTCGGT GTCGACCGGT TGGCGATCGC CGACACCATC
GGCACCGCCA CCCCCCGCCG GGTCAGCGAC CTCGTCACGC AGGTGCGTCC CCGCATCGGC
GACCTGCCGC TGGGCGCCCA TTTCCACAAC ACCCGTGGTG CGGGGCTGGC CAGCGCGTAC
GCCGCGGTCC AGGCCGGGAT CACCCGGCTC GACTCCTCGG TCGGCGGGCT GGGCGGCTGC
CCCTTCGCAC CGGGTGCGAG CGGCAACATC GCCACCGAGG ATCTCGTCTA CCTGTTGCGC
GACAGCGGGA TCAACTGCGA CGTCGACCTG CAGGGGGCCA TCGCCGCCGC CGAGGTCGCC
CGCACGGTCG TCGGCCACGA CCTGCCCAGT GCGCTGCTGC GCGCCGGCGA CCGGATCATC
GGCTGA
 
Protein sequence
MSDLPAKVDI REVSLRDGLQ IEQPIPLSAK LELLEAVVAT GVREVEATAF VSPSKVPALA 
DAAALAAELG RFDQVEFSAL VASSNGAKRA IAAGLRSIEY VVSAADSHSR ANVGRSSMES
VAAIPDIVAI AHDSGATVEV IIATAWDCPF DGPTPPQRVV EIVDAAVGFG VDRLAIADTI
GTATPRRVSD LVTQVRPRIG DLPLGAHFHN TRGAGLASAY AAVQAGITRL DSSVGGLGGC
PFAPGASGNI ATEDLVYLLR DSGINCDVDL QGAIAAAEVA RTVVGHDLPS ALLRAGDRII
G