Gene Mjls_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1543 
Symbol 
ID4877275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1649268 
End bp1650518 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content68% 
IMG OID640138848 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_001069832 
Protein GI126434141 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.671965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0902483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCACC CCGACCCCAC GCTGTTCGGC CACGACCCGT GGTGGCTCAT CCTGGCCAAG 
GCCGTCGGCG TCTTCGTGTT CCTGGTGCTC ACGGTGCTCG CCGCGATCCT GATCGAACGG
AAGGTGCTGG GCCGCATGCA GATGCGGTTC GGCCCCAACC GGGTCGGCCC CAAGGGTCTG
TTGCAGTCCC TGGCCGACGG CATCAAGCTC GCGCTCAAGG AGGGCATCAC CCCCGCCGGT
GTCGACAAGC CGGTCTACCT GCTCGCCCCG GTGATCTCAG TCATCCCGGC GTTCCTCGCG
TTCGCGGTGA TCCCCATGGG CGGTGAGGTG TCGGTGTTCG GGCACCGTAC GGCGCTGCAG
CTGACCGATC TCGCGGTGGC GGTGCTCTAC ATCCTCGCCG TCACCTCCGT CGGGGTGTAC
GGCATCGTGC TGGCGGGCTG GGCGTCCGGG TCGACGTATC CGCTTCTGGG CGGGCTGCGT
TCCAGTGCGC AGGTGGTGTC GTACGAGATC GCGATGGCGC TGTCGTTCGC CACGGTCTTC
CTCTACGCCG GCACGATGTC CACGTCGGGC ATCGTCGCCG CCCAGACCTC CACCTGGTAC
GTCTTCCTGC TGCTGCCGTC GTTCCTGGTG TACGTCACGT CGATGGTCGG TGAGACCAAC
CGCGCGCCGT TCGACCTCCC CGAGGCCGAG GGCGAACTGG TGGGCGGTTT CCACACCGAG
TACTCGTCGC TGAAGTTCGC GATGTTCATG CTCGCCGAGT ACGTCAACAT GACGACGGTC
TCGGCGCTGG CCACCACCAT GTTCCTGGGC GGCTGGCATG CCCCGTGGCC GATCAGCCTG
TGGGAAGGCG CCAACAGCGG GTGGTGGCCG CTGCTGTGGT TCACCGCCAA GGTATGGGTG
TTCCTGTTCG TCTACATCTG GTTGCGGGGC ACGCTGCCCC GGCTGCGCTA CGACCAGTTC
ATGGCGATCG GGTGGAAGAT GCTGATCCCG GTGTCGCTGG CGTGGATCAT GATCGTCGCG
ACCGCCCACA GCCTGCGCAC CACCGGCCAC GGCGGCTGGG CGAGCGGTCT GCTGATCGCG
GGCACGGTGC TCACCTTCGG GCTGGCCGTG GTCCTGTGGC GCACCATGCG ATTCCGCGCC
GACCGGACGG TGCCCGCGCG CACCGCCGCG GACGTGTTCC CGATTCCGCC GATACCCGGC
CGTGCGGGCG CCGCGCGCAC GCCCGAAAGC AGGGAGACGA CAGATGCCTA A
 
Protein sequence
MIHPDPTLFG HDPWWLILAK AVGVFVFLVL TVLAAILIER KVLGRMQMRF GPNRVGPKGL 
LQSLADGIKL ALKEGITPAG VDKPVYLLAP VISVIPAFLA FAVIPMGGEV SVFGHRTALQ
LTDLAVAVLY ILAVTSVGVY GIVLAGWASG STYPLLGGLR SSAQVVSYEI AMALSFATVF
LYAGTMSTSG IVAAQTSTWY VFLLLPSFLV YVTSMVGETN RAPFDLPEAE GELVGGFHTE
YSSLKFAMFM LAEYVNMTTV SALATTMFLG GWHAPWPISL WEGANSGWWP LLWFTAKVWV
FLFVYIWLRG TLPRLRYDQF MAIGWKMLIP VSLAWIMIVA TAHSLRTTGH GGWASGLLIA
GTVLTFGLAV VLWRTMRFRA DRTVPARTAA DVFPIPPIPG RAGAARTPES RETTDA