| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1410 |
|---|
| Symbol | |
|---|
| ID | 4877146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1513949 |
|---|
| End bp | 1514812 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640138718 |
|---|
| Product | catechol 1,2-dioxygenase |
|---|
| Protein accession | YP_001069703 |
|---|
| Protein GI | 126434012 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02438] catechol 1,2-dioxygenase, Actinobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT TCGACACCCC GGTTCCCACC GCCACCGCCG CGGCGTCCGG CGCCTCGGCC
ACCGACCGCT TCCGCGCCGA CAAGTCGCCC TACGACGCGG TCCGCGACAC CCCGCGTGAG
CGGGTCGACC TGCTGGCCCG TGAAGTGCTT ACGGCCGTGC ACGAGACGGT CCGCAGGCAC
AAGGTCACCT ACGACGAGTA CAACGCGCTC AAGGCGTGGC TGATCGGCGT CGGTGAGGAC
GGCGAATGGC CGCTGTTCCT CGACGCCTGG GTCGAGCATG CGGTCGAGGA CGTGGCCACC
TCCCACCGCA GCGGCAACCG CGGCAGCATC GAGGGCCCCT ACTACGTGCC GAACTCGCCC
GATCTCGGCG CGGACGGTGA GATGCCGATG CGCCCCGACG AGCAGGGCAC CCCGCTGGTG
TGGAACGGCA CGATCACCTC CACCGACGGC ACACCACTGA ACGGCAAGGT CGAGCTGTGG
CACGCCGATG CGGACGGCTT CTATTCGCAG TTCGCCCCTG GCCTTCCGCA ATGGAACCTG
CGGGGCAGCT TCACGACCGG ACCCGACGGC GCTTTCCGCA TCCGCACCAT CCGTCCTGCG
CCGTACCAGA TCCCGACCGA CGGTTCGTGC GGCAAGCTGA TCGCCGCCGC GGGATGGCAT
GCCTGGCGAC CGGCCCATCT GCACGTCAAG GTGTCCGCGC CCGGACACGA ATTGCTCACC
GCCCAGTTGT ACTTCCCCGG GGATCCGCAC AACGACGACG ACATCGCCAC CGCCGTCAAA
CCGGAACTCG TGTTGGCGCC GGTGCCACAG CCCGACGGCA GCGAGGCAGT CGTCTACGAC
TTCGTCCTCG ATCCGGTGCG CTGA
|
|---|
| Protein sequence | MTTFDTPVPT ATAAASGASA TDRFRADKSP YDAVRDTPRE RVDLLAREVL TAVHETVRRH
KVTYDEYNAL KAWLIGVGED GEWPLFLDAW VEHAVEDVAT SHRSGNRGSI EGPYYVPNSP
DLGADGEMPM RPDEQGTPLV WNGTITSTDG TPLNGKVELW HADADGFYSQ FAPGLPQWNL
RGSFTTGPDG AFRIRTIRPA PYQIPTDGSC GKLIAAAGWH AWRPAHLHVK VSAPGHELLT
AQLYFPGDPH NDDDIATAVK PELVLAPVPQ PDGSEAVVYD FVLDPVR
|
|---|
| |