Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1390 |
Symbol | |
ID | 4877126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 1489913 |
End bp | 1491661 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640138698 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_001069683 |
Protein GI | 126433992 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.211195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCA GCTCAGAGAA GGACAACGAG AAACACCGCC GACGCCGCGT CGACGCGATC AGGTCGCCGA CCGATGAGGC GATCCCGCAT CCCATCCTCG ACATCCCGGT CGACGAGGAG GCCTACACCG GCTACCGGGG TCTCGACTGG GTGGTCTTCG GCGTCACCGC CGTCATCGCG GTGGCATTCC TGGCCTGGGG GTTCGTCAGC ACCGAGTCGC TGGCCACGGC GTCGGGGAAC GCCCTGACCT GGGTGATGGA CAACACCGGG TGGCTGTTCG TGCTCGCCGC GTCGGGATTC GTGGTCTTCG TGCTGTGGCT GGCGCTCGGT CGCTACGGCA ACATCCCGCT CGGCCGTGAC GACGAGGAAC CCGAGTTCCG CAGCGTCTCG TGGGTCGCGA TGATGTTCAG CGCAGGCATG GGCATCGGGC TGATGTTCTT CGGTGTGGCC GAGCCGCTGA CCCACTTCGC CACCCCGCCA CCGGGCGTCG TGCCACAGGG CGGTGCAGAG ACCGGTGCCG AGGCCGTCGA GTCAGCGATG GCCACCACGC TGTTCCACTG GACCCTCCAT CCGTGGGCGA TCTACGCCGT CGTCGGGCTG GCCATCGCCT ACGGCGTCTA CCGCAAGGGC CGGCTGCAAC TGATCAGCGC GGCGTTCGAA CCCCTGATCG GATCCCGGGC CAACGGGCCG TGGGGCAAGG TGATCGACAT GCTGGCGATC TTCGCCACCC TGTTCGGGTC GGCGGCCTCG CTGGGCTTGG GCGCGTTGCA GATCCGCAGC GGCCTGCAGA TCGTCGGCGG CATCGGCGAG ACCGGCAACA CCGTCCTCAT CGTCATCATC ACCGCCCTGA CGGTCGCGTT CGTGCTGTCG GCCGTCTCCG GGGTGGCGCG GGGCATTCAG TGGCTGTCGA ACATCAACAT GGTGCTCGCG CTGCTGCTGG CGTTGTTCAT CTTCGTCGTC GGCCCGACGG TGTTCATCCT CAACCTGTTG CCGACCTCGA TGGGCAGCTA CCTCGCCGAC CTGGCGATGA TGTCGGCCCG CACCGGTGCC GAGGGTCCCG ACGTCGACAC CTGGCTGCAG TCGTGGACGA TCTTCTACTG GGCCTGGTGG ATCTCGTGGA CCCCGTTCGT CGGCATGTTC ATCGCCCGCA TCTCGCGCGG ACGCACCATC CGGCAGTTCG TCACCGGTGT GCTGCTGGTG CCGAGCCTGG TGTCGCTGGT GTGGTTCTGC ATCCTCGGCG GCGCGGCCAT CGACACCCAG CAGGGCGGGG TGGATTTGGC CGGCGAGGGC AGCAACGAGG AGCAGTTGTT CACCCTGCTC GGTCAGTATC CGATCGCGAC CGTGGCCAGC ATCGTGGTGA TGGTGCTGGT GGCGATCTTC TTCGTCTCCG GCGCCGATGC CGCGTCGATC GTCATGGGTT CGCTGTCCGA GCGCGGCACG ATCAAACCCA CCCGGGGTGT GGTGATCTTC TGGGGCGTCA CGACGGGCGC GGTGGCGGCG GTGATGCTGC TGGTCGGCGG CGCGGACGCG CTGACCGGTC TGCAGACCAT CACGATCATC GCCGCGCTGC CCTTCGTCCT CGTCATGGTG GGGCTGGCGG TGGCGCTGGT CAAAGACCTG CGCAACGATC CGCTGGTGGT GCGGAAGAAG TACGCCGCGG AGGCGGTGGA CAGTGCGGTC ATCCACGGCG TCATCGAACA CGGCGACGAC TTCATCATCT CGGTGGAGAA GGATCCCGAC GCCAGGTAG
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Protein sequence | MTVSSEKDNE KHRRRRVDAI RSPTDEAIPH PILDIPVDEE AYTGYRGLDW VVFGVTAVIA VAFLAWGFVS TESLATASGN ALTWVMDNTG WLFVLAASGF VVFVLWLALG RYGNIPLGRD DEEPEFRSVS WVAMMFSAGM GIGLMFFGVA EPLTHFATPP PGVVPQGGAE TGAEAVESAM ATTLFHWTLH PWAIYAVVGL AIAYGVYRKG RLQLISAAFE PLIGSRANGP WGKVIDMLAI FATLFGSAAS LGLGALQIRS GLQIVGGIGE TGNTVLIVII TALTVAFVLS AVSGVARGIQ WLSNINMVLA LLLALFIFVV GPTVFILNLL PTSMGSYLAD LAMMSARTGA EGPDVDTWLQ SWTIFYWAWW ISWTPFVGMF IARISRGRTI RQFVTGVLLV PSLVSLVWFC ILGGAAIDTQ QGGVDLAGEG SNEEQLFTLL GQYPIATVAS IVVMVLVAIF FVSGADAASI VMGSLSERGT IKPTRGVVIF WGVTTGAVAA VMLLVGGADA LTGLQTITII AALPFVLVMV GLAVALVKDL RNDPLVVRKK YAAEAVDSAV IHGVIEHGDD FIISVEKDPD AR
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