| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1306 |
|---|
| Symbol | |
|---|
| ID | 4877042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 1399188 |
|---|
| End bp | 1400045 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640138614 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001069599 |
|---|
| Protein GI | 126433908 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.603842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATT CCGCACCGAC GCCCGACGGC GTGATCCCCT ACCCGGGCGA GACCTCCAAG
ATGTCCGAAC GCCCCAGCGA CGAGATGACC GACTACGTCG GCCGAGACCT GCTGGCAGGT
AAGCGGGCAC TGATCACCGG GGGCGACTCC GGGATCGGCC GTGCGGTCGC CGTCGCGTTC
GCCAAGGAGG GCGCCGACGT GTCCATCGCC TATCTCGAGG AGCACGCCGA CGCCGAGCAC
ACCGCGGCAC TGGTCGAGCG ATGCGGACGC CGAAGCCTGC TGCTGCCCGG CGATCTGGCG
GAAGCCGAGC AGTGCCGGAC CGTGGTCAAA CGCACGGTCG CCGAGTTCGG CGGCCTCGAC
ATCGTGGTCA ACAACGTGGC CTATCAGAAC CCGACCGAAT CGTTCACCGA CATCAGTGAC
GAACAGTGGC GGCGCACGTT CGCCGTCAAC ATCGACAGCT TCTTCCGGGT CACCAAAGCC
GCGCTCGAAC ACCTTCCCGA CGGCGGCGCG ATCATCAACA CCAGTTCGAT CAACGGGTTG
CGCGGCAACA AGACGCTGAT CGACTATTCG GCCACCAAGG GCGCGGTGTT GGCGCTGACG
TACTCGCTGG CGCAGTCGCT GGCGGATCGC AAGATCCGGG TCAACTGCGT GGCGCCCGGT
CCGGTGTGGA CACCGCTCAT CCCCGCGACG ATGGATGCCG AGAAGACCGA GTCATTCGGT
GAGCAGACAC CGATGGGCCG CGCGGCCCAA CCCGACGAGA TCGCCCCGTC GTACGTGTTC
TTCGCCGCCG GGCGAATGTC GTCGTACTAC AGCGGTGAGG TGCTCGCCCC GATCGGCGGT
GAGACGCTGC CCGGTTGA
|
|---|
| Protein sequence | MVDSAPTPDG VIPYPGETSK MSERPSDEMT DYVGRDLLAG KRALITGGDS GIGRAVAVAF
AKEGADVSIA YLEEHADAEH TAALVERCGR RSLLLPGDLA EAEQCRTVVK RTVAEFGGLD
IVVNNVAYQN PTESFTDISD EQWRRTFAVN IDSFFRVTKA ALEHLPDGGA IINTSSINGL
RGNKTLIDYS ATKGAVLALT YSLAQSLADR KIRVNCVAPG PVWTPLIPAT MDAEKTESFG
EQTPMGRAAQ PDEIAPSYVF FAAGRMSSYY SGEVLAPIGG ETLPG
|
|---|
| |