Gene Mjls_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1293 
Symbol 
ID4877029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1381541 
End bp1386112 
Gene Length4572 bp 
Protein Length1523 aa 
Translation table11 
GC content72% 
IMG OID640138601 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001069586 
Protein GI126433895 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.193705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCAC CTCCGACGGC CGCCGACGGC CTGTCCCGGT TCAGCCCGCT GACCCGGGAA 
TGGTTCGCGG GCACGTTCGT CGAACCGACC CCCGCCCAAG CGCAGGCCTG GTCGGCCATC
GCCGATGGCG ACAACACGCT GGTCATCGCG CCGACGGGTT CGGGCAAGAC GCTCGCCGCG
TTCCTGTGGG CGATCGACAG GCTCGCGTCG TCGGAGCCCA GGCCCGCGCG TGCCGGCACC
CGGGTGCTGT ACGTGTCACC GCTCAAGGCG CTCGCCGTCG ACGTCGAACG CAACCTGCGC
ACCCCGTTGA CCGGTATCGC CCGCATCGCC GATCGGCACG GCGAGCAGGC GCCGACCATC
AGCGTCGGCG TCCGCTCCGG GGACACCACC CCGGCACAGC GCCGTGAACT CGTCACCCGG
CCCCCCGACA TCCTGATCAC CACGCCGGAG TCGCTGTTCC TGATGCTGAC CTCGGCCGCC
CGCGACACGC TCGCCGAGGT GCAGACGGTC ATCGTCGACG AGGTGCACGC GCTGGCGGCC
ACCAAACGCG GTGCGCATCT CGCGTTGTCG CTCGAACGGC TCGACCAGTT GTTGGAACGG
CCCGCCCAGC GCATCGGCCT GTCCGCAACG GTCCGCCCGC CCGAGGAGGT GGCCCGCTTC
CTGTCCGGCC ACGCCCCGAC CACCATCGTC GCCCCGCCGG CCGCCAAGAC CTTCGACCTG
TCGGTGCAGG TGCCGGTGCC CGACATGGCC GACCTCGAGA ACAACACCAT CTGGCCCGAC
GTCGAGGAGC AGATCGTCGA CCTCATCGAG GCGCACCGCT CGTCGATCGT GTTCGCCAAT
TCGCGTCGGC TCGCCGAACG GCTCACCTCG CGGCTCAACG AGATCCATGC CGAACGCACC
GGCACCGAAC TGGACGGCCG CAACGACCGG GTCGGCGGCG GCGCACCGGC CCAGGTGATG
GGCAGCGGTC AGACCTTCGG CGCCGAACCG CTGCTGGCCA AGGCCCACCA CGGGTCGGTG
AGCAAGGAAC AGCGGGCGAT CGTCGAGGAC GACCTCAAGA GCGGGCGGCT CAAGGCCGTC
GTCGCGACCT CCAGCCTCGA ACTCGGCATC GACATGGGTG CGGTGGACCT GGTCATCCAG
GTGGAGTCCC CGCCGTCGGT GGCCAGCGGC CTGCAGCGGG TGGGCCGGGC CGGCCACCAG
GTCGGCGAGA TCTCCCAGGG CGTGCTGTTC CCCAAGCACC GCACCGATCT GATCGGCTGC
GCGGTGACCG TGCAGCGCAT GCTCGCCGGC CAGATCGAGA CCATGCGGGT GCCGGCCAAC
CCCCTCGACG TGCTCGCCCA GCACACCGTG GCGGCCGCGG CGCTCGAACC GCTCGACGCC
GACCGCTGGT TCGACGCGGT GCGGCGCAGT GCCCCGTTCG CCACGCTGCC CCGCAGCGCG
TTCGAGGCGA CGCTGGACCT GCTGTCGGGG AAGTATCCGT CCACGGAGTT CGCCGAACTG
CGTCCCCGCC TGGTGTACGA CCGCGACGCA GGCACGCTGA CCGCGCGGCC GGGAGCGCAG
CGCCTGGCCG TCACCTCAGG CGGCGCGATC CCCGACCGCG GGCTGTTCGC CGTGTACCTG
GCCACCGACT CCGAAAAGCC CTCGCGCGTC GGCGAACTCG ACGAGGAGAT GGTCTACGAG
TCACGGCCCA GCGACGTGAT CTCGCTGGGT GCGACGAGCT GGCGGATCAC CGAGATCACC
CACGACCGGG TGCTGGTGAT CCCGGCACCG GGGCAGCCTG CGCGGCTGCC GTTCTGGCGC
GGCGACGGGG TCGGCCGGCC CGCGGAACTC GGCGCGGCCG TCGGCGCCTT CACCGGGGAA
CTCGCCGCGC TGGGCACCGA TGCGTTCACA CAGCGTTGCC GCACAATGGG TTTCAACGAC
TACGCGACCG ACAACCTCTA CCGGCTGCTC GACGATCAGC GCCAGGCCAC CGGCACGGTG
CCCACCGACA CCACCTTCAT CGTCGAGCGG TTCCGCGACG AACTCGGCGA CTGGCGGATC
ATCCTGCACT CCCCCTACGG GCTGCGCGTA CACGGTCCGC TCGCCCTCGC CGTCGGGCGC
CGGCTGCGCG AGCGCTACGG CATCGACGAG AAACCGACCG CCTCCGACGA CGGCATCATC
GTCCGGTTGC CGGACACCGA TTTCGAGTCC GGCGGGACTG TGTCGTTCGC CGACCTCTTC
GTCTTCGACG CCGACGAGAT CGAACCCATC GTGACCGCGG AGGTCGGCGG GTCTGCGCTG
TTCGCGTCCC GCTTCCGCGA ATGCGCCGCG CGTGCGCTGC TGCTGCCCCG GCGCCATCCC
GGTAAGCGGT CGCCGCTGTG GCACCAGCGT CAGCGCGCCG CGCAACTGCT CGACGTCGCG
CGCAAGTACC CGGACTTTCC CGTCGTGCTG GAGGCCGTGC GGGAGTGCCT GCAGGACGTC
TACGACGTGC CCGCGCTGAT CGAATTGATG CACCGGATCG CCCAGCGCCG GCTGCGGATC
GTCGAGGTGG AGACGACGAC ACCGTCGCCG TTCGCCGCCT CGCTGCTGTT CGGCTACGTC
GGCGCGTTCA TGTACGAGGG CGACAGTCCG CTGGCCGAAC GCCGCGCGGC CGCACTGTCA
TTGGACAGCA CGCTGCTCGC CGAGCTGCTG GGCCGCGTCG AACTGCGCGA GTTGCTCGAC
GCCGAGGTCA TCGCCGCCAC GGCACGCCAA CTGCAGCACC TCGCCGAGGA CCGGCGGGCG
AAGGACGCCG AGGGCGTCGC CGACCTGTTG CGGCTGCTGG GGCCGTTGAC CGCCGAGGAG
ATCGCCCAAC GCTCGACCAC CGACGACGTC GGCGGGTGGC TCGAAGGCCT GTTGTCGGCG
AAGCGAGTGC TGACGGTGTC GTTCGCCGGT CAGACGTGGT GGGTGGCCAT CGAGGATGTC
GGGCTGCTGC GCGACGGCGT CGGGATCGCG GTGCCGGTCG GTGTCCCGCT GTCGTTCCTC
GATCCGGTCG TCGATCCGCT CGGGGAGCTG ATCGGCCGCT ACGCGCGCAC CCACGGCCCG
TTCACCACGG CCGAGGCGGC CGCGCGGTTC GGTCTGGGGC TGCGGGTCAC CGCCGACGTG
CTGGGCCGCC TGGCCGTGGA CGGCCGGTTG GTGCGGGGTG AGTTCACCGA CGCCCCGCCG
GGCGATCCGG CCGGCAGTGA GCAGTGGTGC GACGGCGACG TGCTCAAGAT CCTGCGCCGC
CGGTCGCTGG CGGCGCTGCG GGCACAGGTG GAACCCGTCA GCACCGCGGC GTACGCGCGG
TTCCTGCCGG CCTGGCAGCA TGTCGGCTCG ACGCACAGCG CGGGCGTGGA CGGGCTCGCC
TCGGCGATCG ACCAGCTCGC CGGGGTGCCG ATCCCGGCGT CCGCGGTGGA GCCGCTCGTG
CTCTCGCAGC GGGTGCGCGA CTATCAGCCC GCGATGCTCG ACGAACTGCT GGCCAGTGGC
GAGATCATGT GGTCGGGCGC GGGTCAGATC GGCGGCGGTG ACGGCTGGAT CGCCTTCCAC
CACGCCGACT CCGCACCGCT GACCCTGACC GCACCGGTCG AACTCGAGTT CACCGAGACC
CACCGCGCGA TCATGGATAC CCTGGCCGCA GGCGGAGCCT ACTTCTTCCG TCAGCTCGCA
GACGGCGACT CCGAGACGTT CAAAACCGCG CTGTGGGAAC TGATCTGGAC AGGGTGGGTC
ACCGGGGACA CCTTCGCCCC GGTGCGGGCG ATACTCTCCG GCAGCCGACG GTCCACCGGC
AGGCGCGGCG CCCCCGCACA CCGGCAGCGG TCCCGGCCGC CGCGGTTGAG CAGTTACAGC
ATCGCGCATG CACAGACCCG CGCGAGCGAT CCGACCGTGG CCGGCCGCTG GTCTGCGCTG
CCTGCCGCGG AGCCGGATTC CACTGTGCGC GCGCACTTCT CGGCAGAGCT ACTACTCAAC
CGCCACGGCG TGCTCACCAA GGGTGCGGCC GTCGCGGAAG GGGTTCCCGG CGGGTTCGCG
ATGCTCTACA AGGTGCTGAC CGCGTTCGAG GACGCCGGCC GGTGCCAGCG CGGCTACTTC
GTCGAATCGC TGGGCGGCGC GCAGTTCGCG GTCGCCTCGA CGGTGGACCG GCTGCGGACC
TATCTCGACG AGGTGGACCA GGAACGCCGC GAGTACCGCG CCGTGGTGCT GGCGGCCGCC
GATCCGGCCA ACCCGTACGG CGCCGCGCTG CCCTGGCCGG CCCGCACCGC CGACGGTGAC
GCCGAGGGTT CCCACCGCCC CGGCCGCAAG GCGGGTGCGC TGGTGGCGCT GGTCGACGGC
GAGCTGGCGT GGTTCCTGGA ACGGGGCGGC CGGTCGCTGC TGAGTTTCAC CGACGACGCC
GACGCCCAGC TGGCCGCCGC AGCCGCGCTG GCCGATCTGG TCGGCCGCGG CCGGGTGCAT
TCGCTGCTGG TCGAGAAGGT CAACGGGGTG GGGGTGCTGG AACCCGCCCA GGGTGGCGTG
CGCGCCGCGG TCCACGACGC ACTGATCGGC GCCGGGTTCA CCCGCACCCC GCGCGGCCTG
AGGCTGCGGT GA
 
Protein sequence
MTPPPTAADG LSRFSPLTRE WFAGTFVEPT PAQAQAWSAI ADGDNTLVIA PTGSGKTLAA 
FLWAIDRLAS SEPRPARAGT RVLYVSPLKA LAVDVERNLR TPLTGIARIA DRHGEQAPTI
SVGVRSGDTT PAQRRELVTR PPDILITTPE SLFLMLTSAA RDTLAEVQTV IVDEVHALAA
TKRGAHLALS LERLDQLLER PAQRIGLSAT VRPPEEVARF LSGHAPTTIV APPAAKTFDL
SVQVPVPDMA DLENNTIWPD VEEQIVDLIE AHRSSIVFAN SRRLAERLTS RLNEIHAERT
GTELDGRNDR VGGGAPAQVM GSGQTFGAEP LLAKAHHGSV SKEQRAIVED DLKSGRLKAV
VATSSLELGI DMGAVDLVIQ VESPPSVASG LQRVGRAGHQ VGEISQGVLF PKHRTDLIGC
AVTVQRMLAG QIETMRVPAN PLDVLAQHTV AAAALEPLDA DRWFDAVRRS APFATLPRSA
FEATLDLLSG KYPSTEFAEL RPRLVYDRDA GTLTARPGAQ RLAVTSGGAI PDRGLFAVYL
ATDSEKPSRV GELDEEMVYE SRPSDVISLG ATSWRITEIT HDRVLVIPAP GQPARLPFWR
GDGVGRPAEL GAAVGAFTGE LAALGTDAFT QRCRTMGFND YATDNLYRLL DDQRQATGTV
PTDTTFIVER FRDELGDWRI ILHSPYGLRV HGPLALAVGR RLRERYGIDE KPTASDDGII
VRLPDTDFES GGTVSFADLF VFDADEIEPI VTAEVGGSAL FASRFRECAA RALLLPRRHP
GKRSPLWHQR QRAAQLLDVA RKYPDFPVVL EAVRECLQDV YDVPALIELM HRIAQRRLRI
VEVETTTPSP FAASLLFGYV GAFMYEGDSP LAERRAAALS LDSTLLAELL GRVELRELLD
AEVIAATARQ LQHLAEDRRA KDAEGVADLL RLLGPLTAEE IAQRSTTDDV GGWLEGLLSA
KRVLTVSFAG QTWWVAIEDV GLLRDGVGIA VPVGVPLSFL DPVVDPLGEL IGRYARTHGP
FTTAEAAARF GLGLRVTADV LGRLAVDGRL VRGEFTDAPP GDPAGSEQWC DGDVLKILRR
RSLAALRAQV EPVSTAAYAR FLPAWQHVGS THSAGVDGLA SAIDQLAGVP IPASAVEPLV
LSQRVRDYQP AMLDELLASG EIMWSGAGQI GGGDGWIAFH HADSAPLTLT APVELEFTET
HRAIMDTLAA GGAYFFRQLA DGDSETFKTA LWELIWTGWV TGDTFAPVRA ILSGSRRSTG
RRGAPAHRQR SRPPRLSSYS IAHAQTRASD PTVAGRWSAL PAAEPDSTVR AHFSAELLLN
RHGVLTKGAA VAEGVPGGFA MLYKVLTAFE DAGRCQRGYF VESLGGAQFA VASTVDRLRT
YLDEVDQERR EYRAVVLAAA DPANPYGAAL PWPARTADGD AEGSHRPGRK AGALVALVDG
ELAWFLERGG RSLLSFTDDA DAQLAAAAAL ADLVGRGRVH SLLVEKVNGV GVLEPAQGGV
RAAVHDALIG AGFTRTPRGL RLR