Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_1293 |
Symbol | |
ID | 4877029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 1381541 |
End bp | 1386112 |
Gene Length | 4572 bp |
Protein Length | 1523 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640138601 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001069586 |
Protein GI | 126433895 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.193705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCCAC CTCCGACGGC CGCCGACGGC CTGTCCCGGT TCAGCCCGCT GACCCGGGAA TGGTTCGCGG GCACGTTCGT CGAACCGACC CCCGCCCAAG CGCAGGCCTG GTCGGCCATC GCCGATGGCG ACAACACGCT GGTCATCGCG CCGACGGGTT CGGGCAAGAC GCTCGCCGCG TTCCTGTGGG CGATCGACAG GCTCGCGTCG TCGGAGCCCA GGCCCGCGCG TGCCGGCACC CGGGTGCTGT ACGTGTCACC GCTCAAGGCG CTCGCCGTCG ACGTCGAACG CAACCTGCGC ACCCCGTTGA CCGGTATCGC CCGCATCGCC GATCGGCACG GCGAGCAGGC GCCGACCATC AGCGTCGGCG TCCGCTCCGG GGACACCACC CCGGCACAGC GCCGTGAACT CGTCACCCGG CCCCCCGACA TCCTGATCAC CACGCCGGAG TCGCTGTTCC TGATGCTGAC CTCGGCCGCC CGCGACACGC TCGCCGAGGT GCAGACGGTC ATCGTCGACG AGGTGCACGC GCTGGCGGCC ACCAAACGCG GTGCGCATCT CGCGTTGTCG CTCGAACGGC TCGACCAGTT GTTGGAACGG CCCGCCCAGC GCATCGGCCT GTCCGCAACG GTCCGCCCGC CCGAGGAGGT GGCCCGCTTC CTGTCCGGCC ACGCCCCGAC CACCATCGTC GCCCCGCCGG CCGCCAAGAC CTTCGACCTG TCGGTGCAGG TGCCGGTGCC CGACATGGCC GACCTCGAGA ACAACACCAT CTGGCCCGAC GTCGAGGAGC AGATCGTCGA CCTCATCGAG GCGCACCGCT CGTCGATCGT GTTCGCCAAT TCGCGTCGGC TCGCCGAACG GCTCACCTCG CGGCTCAACG AGATCCATGC CGAACGCACC GGCACCGAAC TGGACGGCCG CAACGACCGG GTCGGCGGCG GCGCACCGGC CCAGGTGATG GGCAGCGGTC AGACCTTCGG CGCCGAACCG CTGCTGGCCA AGGCCCACCA CGGGTCGGTG AGCAAGGAAC AGCGGGCGAT CGTCGAGGAC GACCTCAAGA GCGGGCGGCT CAAGGCCGTC GTCGCGACCT CCAGCCTCGA ACTCGGCATC GACATGGGTG CGGTGGACCT GGTCATCCAG GTGGAGTCCC CGCCGTCGGT GGCCAGCGGC CTGCAGCGGG TGGGCCGGGC CGGCCACCAG GTCGGCGAGA TCTCCCAGGG CGTGCTGTTC CCCAAGCACC GCACCGATCT GATCGGCTGC GCGGTGACCG TGCAGCGCAT GCTCGCCGGC CAGATCGAGA CCATGCGGGT GCCGGCCAAC CCCCTCGACG TGCTCGCCCA GCACACCGTG GCGGCCGCGG CGCTCGAACC GCTCGACGCC GACCGCTGGT TCGACGCGGT GCGGCGCAGT GCCCCGTTCG CCACGCTGCC CCGCAGCGCG TTCGAGGCGA CGCTGGACCT GCTGTCGGGG AAGTATCCGT CCACGGAGTT CGCCGAACTG CGTCCCCGCC TGGTGTACGA CCGCGACGCA GGCACGCTGA CCGCGCGGCC GGGAGCGCAG CGCCTGGCCG TCACCTCAGG CGGCGCGATC CCCGACCGCG GGCTGTTCGC CGTGTACCTG GCCACCGACT CCGAAAAGCC CTCGCGCGTC GGCGAACTCG ACGAGGAGAT GGTCTACGAG TCACGGCCCA GCGACGTGAT CTCGCTGGGT GCGACGAGCT GGCGGATCAC CGAGATCACC CACGACCGGG TGCTGGTGAT CCCGGCACCG GGGCAGCCTG CGCGGCTGCC GTTCTGGCGC GGCGACGGGG TCGGCCGGCC CGCGGAACTC GGCGCGGCCG TCGGCGCCTT CACCGGGGAA CTCGCCGCGC TGGGCACCGA TGCGTTCACA CAGCGTTGCC GCACAATGGG TTTCAACGAC TACGCGACCG ACAACCTCTA CCGGCTGCTC GACGATCAGC GCCAGGCCAC CGGCACGGTG CCCACCGACA CCACCTTCAT CGTCGAGCGG TTCCGCGACG AACTCGGCGA CTGGCGGATC ATCCTGCACT CCCCCTACGG GCTGCGCGTA CACGGTCCGC TCGCCCTCGC CGTCGGGCGC CGGCTGCGCG AGCGCTACGG CATCGACGAG AAACCGACCG CCTCCGACGA CGGCATCATC GTCCGGTTGC CGGACACCGA TTTCGAGTCC GGCGGGACTG TGTCGTTCGC CGACCTCTTC GTCTTCGACG CCGACGAGAT CGAACCCATC GTGACCGCGG AGGTCGGCGG GTCTGCGCTG TTCGCGTCCC GCTTCCGCGA ATGCGCCGCG CGTGCGCTGC TGCTGCCCCG GCGCCATCCC GGTAAGCGGT CGCCGCTGTG GCACCAGCGT CAGCGCGCCG CGCAACTGCT CGACGTCGCG CGCAAGTACC CGGACTTTCC CGTCGTGCTG GAGGCCGTGC GGGAGTGCCT GCAGGACGTC TACGACGTGC CCGCGCTGAT CGAATTGATG CACCGGATCG CCCAGCGCCG GCTGCGGATC GTCGAGGTGG AGACGACGAC ACCGTCGCCG TTCGCCGCCT CGCTGCTGTT CGGCTACGTC GGCGCGTTCA TGTACGAGGG CGACAGTCCG CTGGCCGAAC GCCGCGCGGC CGCACTGTCA TTGGACAGCA CGCTGCTCGC CGAGCTGCTG GGCCGCGTCG AACTGCGCGA GTTGCTCGAC GCCGAGGTCA TCGCCGCCAC GGCACGCCAA CTGCAGCACC TCGCCGAGGA CCGGCGGGCG AAGGACGCCG AGGGCGTCGC CGACCTGTTG CGGCTGCTGG GGCCGTTGAC CGCCGAGGAG ATCGCCCAAC GCTCGACCAC CGACGACGTC GGCGGGTGGC TCGAAGGCCT GTTGTCGGCG AAGCGAGTGC TGACGGTGTC GTTCGCCGGT CAGACGTGGT GGGTGGCCAT CGAGGATGTC GGGCTGCTGC GCGACGGCGT CGGGATCGCG GTGCCGGTCG GTGTCCCGCT GTCGTTCCTC GATCCGGTCG TCGATCCGCT CGGGGAGCTG ATCGGCCGCT ACGCGCGCAC CCACGGCCCG TTCACCACGG CCGAGGCGGC CGCGCGGTTC GGTCTGGGGC TGCGGGTCAC CGCCGACGTG CTGGGCCGCC TGGCCGTGGA CGGCCGGTTG GTGCGGGGTG AGTTCACCGA CGCCCCGCCG GGCGATCCGG CCGGCAGTGA GCAGTGGTGC GACGGCGACG TGCTCAAGAT CCTGCGCCGC CGGTCGCTGG CGGCGCTGCG GGCACAGGTG GAACCCGTCA GCACCGCGGC GTACGCGCGG TTCCTGCCGG CCTGGCAGCA TGTCGGCTCG ACGCACAGCG CGGGCGTGGA CGGGCTCGCC TCGGCGATCG ACCAGCTCGC CGGGGTGCCG ATCCCGGCGT CCGCGGTGGA GCCGCTCGTG CTCTCGCAGC GGGTGCGCGA CTATCAGCCC GCGATGCTCG ACGAACTGCT GGCCAGTGGC GAGATCATGT GGTCGGGCGC GGGTCAGATC GGCGGCGGTG ACGGCTGGAT CGCCTTCCAC CACGCCGACT CCGCACCGCT GACCCTGACC GCACCGGTCG AACTCGAGTT CACCGAGACC CACCGCGCGA TCATGGATAC CCTGGCCGCA GGCGGAGCCT ACTTCTTCCG TCAGCTCGCA GACGGCGACT CCGAGACGTT CAAAACCGCG CTGTGGGAAC TGATCTGGAC AGGGTGGGTC ACCGGGGACA CCTTCGCCCC GGTGCGGGCG ATACTCTCCG GCAGCCGACG GTCCACCGGC AGGCGCGGCG CCCCCGCACA CCGGCAGCGG TCCCGGCCGC CGCGGTTGAG CAGTTACAGC ATCGCGCATG CACAGACCCG CGCGAGCGAT CCGACCGTGG CCGGCCGCTG GTCTGCGCTG CCTGCCGCGG AGCCGGATTC CACTGTGCGC GCGCACTTCT CGGCAGAGCT ACTACTCAAC CGCCACGGCG TGCTCACCAA GGGTGCGGCC GTCGCGGAAG GGGTTCCCGG CGGGTTCGCG ATGCTCTACA AGGTGCTGAC CGCGTTCGAG GACGCCGGCC GGTGCCAGCG CGGCTACTTC GTCGAATCGC TGGGCGGCGC GCAGTTCGCG GTCGCCTCGA CGGTGGACCG GCTGCGGACC TATCTCGACG AGGTGGACCA GGAACGCCGC GAGTACCGCG CCGTGGTGCT GGCGGCCGCC GATCCGGCCA ACCCGTACGG CGCCGCGCTG CCCTGGCCGG CCCGCACCGC CGACGGTGAC GCCGAGGGTT CCCACCGCCC CGGCCGCAAG GCGGGTGCGC TGGTGGCGCT GGTCGACGGC GAGCTGGCGT GGTTCCTGGA ACGGGGCGGC CGGTCGCTGC TGAGTTTCAC CGACGACGCC GACGCCCAGC TGGCCGCCGC AGCCGCGCTG GCCGATCTGG TCGGCCGCGG CCGGGTGCAT TCGCTGCTGG TCGAGAAGGT CAACGGGGTG GGGGTGCTGG AACCCGCCCA GGGTGGCGTG CGCGCCGCGG TCCACGACGC ACTGATCGGC GCCGGGTTCA CCCGCACCCC GCGCGGCCTG AGGCTGCGGT GA
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Protein sequence | MTPPPTAADG LSRFSPLTRE WFAGTFVEPT PAQAQAWSAI ADGDNTLVIA PTGSGKTLAA FLWAIDRLAS SEPRPARAGT RVLYVSPLKA LAVDVERNLR TPLTGIARIA DRHGEQAPTI SVGVRSGDTT PAQRRELVTR PPDILITTPE SLFLMLTSAA RDTLAEVQTV IVDEVHALAA TKRGAHLALS LERLDQLLER PAQRIGLSAT VRPPEEVARF LSGHAPTTIV APPAAKTFDL SVQVPVPDMA DLENNTIWPD VEEQIVDLIE AHRSSIVFAN SRRLAERLTS RLNEIHAERT GTELDGRNDR VGGGAPAQVM GSGQTFGAEP LLAKAHHGSV SKEQRAIVED DLKSGRLKAV VATSSLELGI DMGAVDLVIQ VESPPSVASG LQRVGRAGHQ VGEISQGVLF PKHRTDLIGC AVTVQRMLAG QIETMRVPAN PLDVLAQHTV AAAALEPLDA DRWFDAVRRS APFATLPRSA FEATLDLLSG KYPSTEFAEL RPRLVYDRDA GTLTARPGAQ RLAVTSGGAI PDRGLFAVYL ATDSEKPSRV GELDEEMVYE SRPSDVISLG ATSWRITEIT HDRVLVIPAP GQPARLPFWR GDGVGRPAEL GAAVGAFTGE LAALGTDAFT QRCRTMGFND YATDNLYRLL DDQRQATGTV PTDTTFIVER FRDELGDWRI ILHSPYGLRV HGPLALAVGR RLRERYGIDE KPTASDDGII VRLPDTDFES GGTVSFADLF VFDADEIEPI VTAEVGGSAL FASRFRECAA RALLLPRRHP GKRSPLWHQR QRAAQLLDVA RKYPDFPVVL EAVRECLQDV YDVPALIELM HRIAQRRLRI VEVETTTPSP FAASLLFGYV GAFMYEGDSP LAERRAAALS LDSTLLAELL GRVELRELLD AEVIAATARQ LQHLAEDRRA KDAEGVADLL RLLGPLTAEE IAQRSTTDDV GGWLEGLLSA KRVLTVSFAG QTWWVAIEDV GLLRDGVGIA VPVGVPLSFL DPVVDPLGEL IGRYARTHGP FTTAEAAARF GLGLRVTADV LGRLAVDGRL VRGEFTDAPP GDPAGSEQWC DGDVLKILRR RSLAALRAQV EPVSTAAYAR FLPAWQHVGS THSAGVDGLA SAIDQLAGVP IPASAVEPLV LSQRVRDYQP AMLDELLASG EIMWSGAGQI GGGDGWIAFH HADSAPLTLT APVELEFTET HRAIMDTLAA GGAYFFRQLA DGDSETFKTA LWELIWTGWV TGDTFAPVRA ILSGSRRSTG RRGAPAHRQR SRPPRLSSYS IAHAQTRASD PTVAGRWSAL PAAEPDSTVR AHFSAELLLN RHGVLTKGAA VAEGVPGGFA MLYKVLTAFE DAGRCQRGYF VESLGGAQFA VASTVDRLRT YLDEVDQERR EYRAVVLAAA DPANPYGAAL PWPARTADGD AEGSHRPGRK AGALVALVDG ELAWFLERGG RSLLSFTDDA DAQLAAAAAL ADLVGRGRVH SLLVEKVNGV GVLEPAQGGV RAAVHDALIG AGFTRTPRGL RLR
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