Gene Mjls_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1250 
Symbol 
ID4876986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1327914 
End bp1328822 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID640138558 
ProductRNA polymerase sigma factor SigJ 
Protein accessionYP_001069543 
Protein GI126433852 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA GTGCGCGGAT CGACGAGTTC GAGAGCCTGC GACCGTATCT GCTGTCGGTG 
GCCTACCGCC TGACGGGTTC GGTGACCGAT GCCGAAGACG CCGTGCAGGA TGCCTGGCTG
CGGTGGGATG CGCTGGGGGA GGACCGGTCC GGCATCGCCG ATCTGCGCGC GTGGCTGACG
ACGGTGGTCA GCCGCATCGG CCTCGACCGG CTGCGGTCGG CCGCCCGGCG ACGGGAGACC
TACGTCGGCG AATGGCTGCC CGAACCCGTC GTCACGGGCT TCGACCGCAC CGATCCGTTG
TCGGCGGTGG TCGCCGCCGA GGACGCCCGG TTCGCGGCGA TGGTGGTGCT CGAACGGTTG
ACCCCCGACC AGCGGGTGGC GTTCGTCCTG CACGACGGCT TCGCGATGTC GTTCACCGAG
ATCGCCGGCG TCCTCGGGGT GAACCCCGCC GCGGCCCGTC AACTCGCGTC GCGGGCCCGC
CGGGCCGTCG CCGATGCCGA GGCGCCCGCC CGCGACCCGT CCCACGACGA GGTAGTGGGC
CGGCTGATGG CGGCGATGGC GGCGGGTGAC ATGGCCGCCG TCGTCGAACT GCTGCACCCC
GACGTCACCT TCACCGGAGA CTCGAACCGC AAGGCGCCCA CCGCTCCTCG CGTCATCCAC
GGCGCCGACA AGGTGGCCAG GTTCGTCTTC GGGCTGGCCC GTCGCTACGG TCCGCGGTTC
TTCGAGGCGG GCGACCTCGT ACTCGTCAAC GGCGACCTCG GGCTCTACAC CGCGGGCCTG
CCCGCCGACG GTGAGTGGCC CGCGATGGCG CCGCGCATCC AGGCGCTGAC CGTGCGTGAC
GGCAAGGTGT GCGCGATCTG GGACGTCGCC AACCCGGACA AGTTCACGGC GTCGCCTCTT
CGTCGGTAG
 
Protein sequence
MTASARIDEF ESLRPYLLSV AYRLTGSVTD AEDAVQDAWL RWDALGEDRS GIADLRAWLT 
TVVSRIGLDR LRSAARRRET YVGEWLPEPV VTGFDRTDPL SAVVAAEDAR FAAMVVLERL
TPDQRVAFVL HDGFAMSFTE IAGVLGVNPA AARQLASRAR RAVADAEAPA RDPSHDEVVG
RLMAAMAAGD MAAVVELLHP DVTFTGDSNR KAPTAPRVIH GADKVARFVF GLARRYGPRF
FEAGDLVLVN GDLGLYTAGL PADGEWPAMA PRIQALTVRD GKVCAIWDVA NPDKFTASPL
RR