| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1227 |
|---|
| Symbol | |
|---|
| ID | 4876963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 1302337 |
|---|
| End bp | 1303293 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640138535 |
|---|
| Product | helix-turn-helix domain-containing protein |
|---|
| Protein accession | YP_001069520 |
|---|
| Protein GI | 126433829 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0166528 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACGC ACACCGCGAG CCTCGTCCGC CGCGCCTCGT GGGCCACGCC CGACCTCGCC
GAGGCGCACG ACCTCCTGCA CGCCGAGTAC GGGGCAAGCC TGAGGCTGGG CGAATCGCGG
GCTTCGGCCC GCCAGCTCAG CGTCGACCGT CGTCAGACCC CCACCTTCGA ATGCCACGAC
GTACGGTTGC CCGCCCGACT GCAGTTCGAC GTCGAGGACT ACGGCGGTGT GGTCATCGCC
GCCCTGCAGG CCGGCACGGT AACCGCGAAC AGCGACGCCC ACGGCGTCTC GTACCGGCGC
GGTGACGTGT TCATGTCGAA CTTCCCCGGC GCGCACTACC GCTGCCACGC CGACCACGCC
TGGTCGCACA CCGTCACGAT CCCGGTGCGG GGGCTGGCCG AATCCGCCGG TGTCCCGCCG
TCGTCGCTGC GGTTCATGTC GGGCAACCCG GTCAGCCACG ACGCCGCCGC GAAGTGGGTG
GCCACGCTCG AGACCGTGGA GCGGTTGCTC GACGACCCGG ACACCGCCAA CCCGATCGTG
CTCGGCAAGG CCGGCCGCAT GCTGGCCGCC CGAGTGCTCG AGATCTTCCC CGTGACCAGG
ACTCCCGGGA CGGAACACCC GGGCCGGCTG GTGCCCAACT TCCTCCGACG GGCGATCGCC
TACATGGAGG ACAACGCCAC CGCGGACATC GGCGTCGCCG ACATCGCCGC CGCGGTCGAG
CTCACCCCCG ACGGCGTGAC CTACCTGTTC CGTCGTCACC TCGGGGTGGG CCCGCTCGAT
CACCTGCGTC GTATCCGGCT CGATCACGCC CACCGGGACC TGCTGGACCA CGACCCCGAG
TCGACGACGG TGTTCTCCAT CGCGGCCCGC TGGGGGTTCC CGCACCTGCC GTCGTTCGAG
GAGCTCTACT GCGGCTCCTA CGGCCAGAAT CCGCAGGACA CGCTGCAGGC CGGCTGA
|
|---|
| Protein sequence | MDTHTASLVR RASWATPDLA EAHDLLHAEY GASLRLGESR ASARQLSVDR RQTPTFECHD
VRLPARLQFD VEDYGGVVIA ALQAGTVTAN SDAHGVSYRR GDVFMSNFPG AHYRCHADHA
WSHTVTIPVR GLAESAGVPP SSLRFMSGNP VSHDAAAKWV ATLETVERLL DDPDTANPIV
LGKAGRMLAA RVLEIFPVTR TPGTEHPGRL VPNFLRRAIA YMEDNATADI GVADIAAAVE
LTPDGVTYLF RRHLGVGPLD HLRRIRLDHA HRDLLDHDPE STTVFSIAAR WGFPHLPSFE
ELYCGSYGQN PQDTLQAG
|
|---|
| |