| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1141 |
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| Symbol | rpsD |
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| ID | 4876878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 1218206 |
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| End bp | 1218811 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640138450 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001069435 |
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| Protein GI | 126433744 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.273227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT ACACCGGACC CGCCACCCGC AAGTCGCGCC GCCTCGGCGT CGACCTCGTC
GGTGGTGATC AGTCGTTCGA GAAGCGCCCC TACCCGCCCG GCCAGCACGG TCGCGCGCGG
ATCAAGGAGA GCGAATACCG CACCCAGCTG CAGGAGAAGC AGAAGGCCCG CTTCACCTAC
GGCGTGCTGG AGAAGCAGTT CCGTCGCTAC TACGACGAGG CCAACCGGCA GCCCGGCAAG
ACCGGCGACA ACCTGCTGCG CATCCTCGAG AGCCGGCTGG ACAACGTCGT GTACCGCGCC
GGCCTGGCGC GCACCCGCCG GATGGCCCGC CAGCTCGTCA GCCACGGCCA CTTCACCGTC
AACGGCGTCA AGGTCGACAT CCCCAGCTAC CGGGTGTCGC AGTACGACAT CATCGACGTG
CGCGAGAAGT CGCTGAACAC CGATCCGTTC GTGATCGCGC GGGAGACCGC GGGTGACCGG
CCGATCCCGT CGTGGCTGCA GGTCGTCGGC GAACGTCAGC GCATCCTCGT CCACCAGTTG
CCGGAGCGCG CGCAGATCGA CGTGCCGCTC ACCGAGCAGC TGATCGTCGA GCTCTACTCG
AAGTAA
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| Protein sequence | MARYTGPATR KSRRLGVDLV GGDQSFEKRP YPPGQHGRAR IKESEYRTQL QEKQKARFTY
GVLEKQFRRY YDEANRQPGK TGDNLLRILE SRLDNVVYRA GLARTRRMAR QLVSHGHFTV
NGVKVDIPSY RVSQYDIIDV REKSLNTDPF VIARETAGDR PIPSWLQVVG ERQRILVHQL
PERAQIDVPL TEQLIVELYS K
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