| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1104 |
|---|
| Symbol | |
|---|
| ID | 4876843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1181834 |
|---|
| End bp | 1183534 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640138416 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001069401 |
|---|
| Protein GI | 126433710 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGG TCGGGCCGGG CGACCAGTGC AGCGTTCGCC CAATCGGCGA AACGCTGTCG
CAGCTGCGGC TGCGTGAGCT GCTCACCGAG GTTCAGGACC GGGTCGAGGA GATCGTCGAG
GGCCGGGACC GGCTCGACGG TCTGGTCGAC GCGATGCTCA CGGTCACCTC CGGACTCGAC
CTGGACGCCA CCCTGCGCAC CATCGTGCAC ACGGCCATCG AGCTGATCGA CGCGCGTTAC
GGGGCACTGG GGGTGCGCGG ACACGACCAC GAGCTGGTCG AGTTCATCTA CGAGGGCATC
GACGAACCCA CCCGGCTGGC GATCGGACCG CTGCCGCAGG GCCGGGGTGT CCTCGGCGTG
CTGATCGACG ACCCGCAGCC GATCCGGCTG GAAAACATCC ACGACCATCC CGCCTCGGTC
GGCTTCCCCG AGCACCACCC CCCGATGCGC ACCTTCCTCG GTGTGCCGAT CCGGATCCGG
GATGAGGTCT TCGGCAACCT GTATCTGTCG GAGAAGACGT CCGGACAACC GTTCAGCGAG
GACGACGAGG TGCTGACCCA GGCCCTCGCG GCCGCCGCAG GCATCGCGAT CGACAACGCC
CGTCTGTTCG AACAGTCCCG CACGCGCCAG GCGTGGATCG AGGCGACCCG CGACATCGCG
ACCGAGTTGC TCGGCGGCGC TGATCCCGCG CGGGTGTACC GCCTGGTGGC CGAGGAGTCG
CTCAAGCTGA CCCACGCCGA CGTCGCGTTC GTCGCCGTGC CCGCCGACGG TGACGAGCTC
GTCATCGCCG ACGCCGCCGG GGATACCCGC ACGGACCCAT CGGTGGCGTC GCTGATCCCG
TTGCAGGGCA ACGATATCGG TGAGGCGTTC GTGGCGCGGA CACCCCGGCT GGTCGAGGTG
ATCGCCGCGC AGACCGGCCT GCTCGACGAC GCCGGCCCCG CGCTGATCCT GCCGATGAGG
ACGACCGAGG CGGTCGCCGG GGTGGTGGTG CTGCTGCGGC GCGCCGGGCG GCCGGCGTTC
ACCGCCGAGC AGTTGGAGAT GATGGCGGCT TTCGTCGACC AGGCGGCGCT GGCCTGGCAG
TCGGCGGTCG CCCAGCGCCG CATCCGCGAA CTCGACGTCC TGACCGACCG CGATCGCATC
GCCCGCGATC TGCACGATCA GGTGATCCAA CGGCTGTTCG GGGTGGGGTT GACGCTGCAG
GGCACGATTC CGCGCGCCCG GACGCCGGAT GTGCAACGGC GGCTGATCGA ATCCGTGGAC
GATCTGCAGG AGGTGATCCA GCAGATCCGC ACGGCCATCT TCGACCTACA GGGCGGGTCG
TCGGGCAGCA CCCGGTTGCG CCAACGTCTC GACGAGGCCA TCGCCCATCT CGCCGGCGCC
GAACTGCGGA CGACGGTTCA GTACGTCGGG CCGTTGTCCG TGGTCGGTGC CGAACTCGCC
GACCATGCCG AAGCGGTGGT GTCCGAAGCG GTCAGCAACG CCGTGCGTCA CGCGCAGGCG
ACCGAGCTCT CGGTGCTGGT GACGGTGGAC GACGATCTGC GGATCGAGAT CAGGGACAAC
GGCGTCGGGA TCCCGGACAA CCTCACCGAG AGCGGTCTGG CCAACCTGCG CCGGCGCGCC
GAAGAGGTCG GCGGTGCTCT CACGATCGAA CCCGCCGCCG GAGGCGGTAC CTGCCTGAGC
TGGACCGCCC CACTGACCTG A
|
|---|
| Protein sequence | MTGVGPGDQC SVRPIGETLS QLRLRELLTE VQDRVEEIVE GRDRLDGLVD AMLTVTSGLD
LDATLRTIVH TAIELIDARY GALGVRGHDH ELVEFIYEGI DEPTRLAIGP LPQGRGVLGV
LIDDPQPIRL ENIHDHPASV GFPEHHPPMR TFLGVPIRIR DEVFGNLYLS EKTSGQPFSE
DDEVLTQALA AAAGIAIDNA RLFEQSRTRQ AWIEATRDIA TELLGGADPA RVYRLVAEES
LKLTHADVAF VAVPADGDEL VIADAAGDTR TDPSVASLIP LQGNDIGEAF VARTPRLVEV
IAAQTGLLDD AGPALILPMR TTEAVAGVVV LLRRAGRPAF TAEQLEMMAA FVDQAALAWQ
SAVAQRRIRE LDVLTDRDRI ARDLHDQVIQ RLFGVGLTLQ GTIPRARTPD VQRRLIESVD
DLQEVIQQIR TAIFDLQGGS SGSTRLRQRL DEAIAHLAGA ELRTTVQYVG PLSVVGAELA
DHAEAVVSEA VSNAVRHAQA TELSVLVTVD DDLRIEIRDN GVGIPDNLTE SGLANLRRRA
EEVGGALTIE PAAGGGTCLS WTAPLT
|
|---|
| |