| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1061 |
|---|
| Symbol | rpsE |
|---|
| ID | 4876802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1141501 |
|---|
| End bp | 1142172 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640138375 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_001069360 |
|---|
| Protein GI | 126433669 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000257421 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.422171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCG AGCAGGCAAC CAATGCCGGG CCGGCGACAT CCGACGGCCG CGGCTCGCGG
GGTGACCGCG ATGGTCGTGG CCGCCGCGAC GACCGTGGCG GCCGTGGCCG CGACGGCGGT
GACAAGAGCA ATTACCTGGA GCGCGTCGTC TCGATCAACC GCGTCTCCAA GGTGGTCAAG
GGTGGCCGTC GCTTCAGCTT CACCGCCCTG GTGATCGTCG GTGACGGCAA CGGCATGGTC
GGTGTCGGCT ACGGCAAGGC CAAGGAAGTT CCGGCCGCCA TCGCCAAGGG TGTCGAAGAG
GCTCGTAAGG GCTTCTTCCG CGTGCCGCTG ATCGGCGGGA CCATCGTGCA CCCGGTGCAG
GGTGAGGCCG CCGCGGGCGT CGTCATGCTG CGTCCGGCGA GCCCCGGTAC CGGTGTGATC
GCCGGTGGTG CGGCGCGTGC GGTGCTGGAA TGCGCCGGCG TCCACGACAT CCTGGCCAAG
TCTCTGGGCA GTGACAACGC GATCAACGTC GTGCATGCCA CCGTTGCCGC GCTCAAGCAG
ATCCAGCGTC CTGAAGAGGT CGCCGCCCGT CGCGGGCTGC CCCTCGAGGA CGTCGCGCCG
GCCAGCATGC TCAAGGCCCG GCGTGAGGCC GACGCGCTCG CCGCGTCCTC GTCACGTGAA
GGGTCGGTGT GA
|
|---|
| Protein sequence | MMAEQATNAG PATSDGRGSR GDRDGRGRRD DRGGRGRDGG DKSNYLERVV SINRVSKVVK
GGRRFSFTAL VIVGDGNGMV GVGYGKAKEV PAAIAKGVEE ARKGFFRVPL IGGTIVHPVQ
GEAAAGVVML RPASPGTGVI AGGAARAVLE CAGVHDILAK SLGSDNAINV VHATVAALKQ
IQRPEEVAAR RGLPLEDVAP ASMLKARREA DALAASSSRE GSV
|
|---|
| |