| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1040 |
|---|
| Symbol | rplC |
|---|
| ID | 4876781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1128465 |
|---|
| End bp | 1129118 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640138354 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_001069339 |
|---|
| Protein GI | 126433648 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTA AAGGCATTCT GGGCACCAAG CTGGGCATGA CGCAGGTGTT CGACGAGAAC
AACAAGGTCG TGCCGGTGAC GGTCGTCAAG GCCGGCCCCA ACGTCGTGAC CCGGATCCGT
ACCCCCGAGC GGGACGGTTA CAGCGCGGTG CAGATCGCCT ACGGCGAGAT CAGCCCCCGC
AAGGTCAACA AGCCGGTGAC CGGTCAGTTC GCCGCCGCCG GCGTCAACCC GCGCCGCCAT
CTCGCCGAGC TCCGGCTCGA CGACGAGTCC GCGGCCGCTG ACTACGAGGT CGGCCAGGAG
CTCACGGCGG AGGTCTTCTC CGACGGCGCC TACGTCGACG TCACCGGCAC CAGCAAGGGC
AAGGGCTTCG CCGGCACCAT GAAGCGGCAC GGGTTCAAGG GCCAGGGCGC CGCGCACGGC
GCCCAGGCCG TGCACCGCCG GCCCGGTTCG ATCGGTGGCT GCGCCACCCC GGGCCGCGTG
TTCAAGGGCA CCCGCATGTC GGGCCGCATG GGCAGCGACC GGGTGACCAC GCAGAACCTG
GTCGTGCACA AGGTCGACGC CGCCAACGGC GTTCTGCTCA TCAAGGGCGC CATCCCCGGC
CGCAACGGTG GACTGGTGAT GGTCCGCAGC GCAATCAAGC GAGGCGAGAA GTAA
|
|---|
| Protein sequence | MARKGILGTK LGMTQVFDEN NKVVPVTVVK AGPNVVTRIR TPERDGYSAV QIAYGEISPR
KVNKPVTGQF AAAGVNPRRH LAELRLDDES AAADYEVGQE LTAEVFSDGA YVDVTGTSKG
KGFAGTMKRH GFKGQGAAHG AQAVHRRPGS IGGCATPGRV FKGTRMSGRM GSDRVTTQNL
VVHKVDAANG VLLIKGAIPG RNGGLVMVRS AIKRGEK
|
|---|
| |