| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0998 |
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| Symbol | |
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| ID | 4876739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. JLS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009077 |
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| Strand | + |
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| Start bp | 1083901 |
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| End bp | 1087848 |
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| Gene Length | 3948 bp |
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| Protein Length | 1315 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640138312 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001069297 |
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| Protein GI | 126433606 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.576446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGACG TCAACTTCTT CGATGAGCTC CGGATCGGCC TCGCCACCGC CGACGACATT
CGTCAGTGGT CCTACGGTGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTCAAG
CCGGAGAAGG ATGGCCTGTT CTGCGAGAAG ATCTTCGGAC CGACTCGCGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTCCGCTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GCGCCAAGGT GCGTCGTGAG CGGATGGGCC ACATCGAGCT GGCCGCACCC
GTCACGCACA TCTGGTACTT CAAGGGTGTG CCGTCGCGGT TGGGCTACCT GCTCGACCTG
GCCCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCGGCCT ACGTCATCAC CGACGTCAAC
GACGAGATGC GCCACAACGA GCTCTCGACC CTCGAGGCCG AGATGGTCGT CGAGAAGAAG
GCCGTCGAGG ATCAGCGCGA CGCCGACCTG GAGGCCCGCG CCCAGAAGCT CGAGGCCGAC
CTGGCCGAGC TCGAGGCCGA AGGCGCCAAG AGCGACGTGC GCCGCAAGGT GCGCGACGGC
GGCGAGCGGG AGATGCGTCA GCTCCGCGAC CGGGCCCAGC GTGAGCTGGA CCGGCTCGAC
GAGATCTGGA CCACCTTCAC CAAGCTGGCT CCCAAGCAGC TCATCGTCGA CGAGGTGCTC
TACCGCGAGC TCGTCGACCG TTACGGCGAG TACTTCACCG GTGCCATGGG CGCGGAGTCG
ATCAAGAAGC TCATCGAGAA CTTCGACATC GAGGCCGAGG CCGAGAACCT GCGCGAGACC
ATCCGCAGCG GCAAGGGTCA GAAGAAGCTG CGCGCGCTCA AGCGACTGAA GGTCGTCGCG
GCGTTCCAGA CGAATCGCAA CTCGCCCATG GGCATGGTGC TCGACGCCGT TCCGGTGATC
CCGCCGGAGC TGCGCCCGAT GGTTCAGCTC GACGGTGGCC GCTTCGCCAC CTCCGACCTG
AACGACCTGT ACCGCCGCGT GATCAACCGC AACAACCGGT TGAAGCGACT GATCGACCTC
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TCCAGGAGTC GGTGGACGCG
CTGTTCGACA ACGGCCGTCG CGGCCGGCCC GTCACCGGGC CCGGTAACCG TCCGCTCAAG
TCGCTGTCCG ATCTGCTCAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTCGGTAAG
CGCGTCGACT ACTCGGGCCG TTCGGTCATC GTTGTGGGTC CCCAGCTGAA GCTGCACCAG
TGCGGTCTGC CGAAGCTGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGTCTG
GTCGACCTGA ACCACGCGCA GAACATCAAG AGCGCCAAGC GCATGGTGGA ACGTCAGCGT
CCGCAGGTGT GGGACGTGCT CGAAGAGGTC ATCGCCGAGC ACCCGGTTCT GCTGAACCGC
GCACCCACGC TGCACCGCCT CGGTATCCAG GCCTTCGAGC CGCAGCTGGT CGAGGGTAAG
GCCATCCAGC TGCACCCGCT GGTCTGCGAG GCGTTCAACG CCGACTTCGA CGGCGACCAG
ATGGCCGTGC ACCTTCCGCT GAGTGCGGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG
TCCTCGAACA ACATCCTGTC GCCCGCGTCG GGTAAGCCGC TGGCCATGCC GCGTCTGGAC
ATGGTCACCG GGCTGTACTT CCTGACCACG ATGATCGAGG GCGACAAGGG CGAGTACCGT
CCCGCCGCCA CGGATCAGCC GGAGGAGGGC GTGTACAGCT CGCCCGCCGA GGCGATCATG
GCGATGGACC GCGGTGCGCT GAGCGTGCGC GCGAAGATCA AGGTGCGGCT GACCCAGCTG
CGGCCGCCGG CCGCCCTGGA GGCCGAGCTG TTCGAGAACG GGTGGAAGCC GGGCCTGGCC
TGGACCGCCG AGACGACGCT CGGTCGCGTG ATGTTCAACG AGCTGCTGCC GATCTCGTAT
CCGTTCATCA ACGAGCAGAT GCACAAGAAG GTGCAGGCCC GGATCATCAA CGATCTGGCC
GAGCGCTTCC CGATGATCGT CGTCGCACAG ACCGTCGACA AGCTCAAGGA CGCCGGTTTC
CACTGGGCCA CCCGTTCGGG TGTCACGGTC TCGATGGCCG ACGTGCTCGT GCCGCCGCAG
AAGCAGGAGA TCCTCGACCG CTACGAGGCG GAAGCCGACG GGATCGAGCG CAAGTACCAG
CGTGGCGCCC TGAACCACAA GGAGCGCAAC GACTCGCTGG TCAAGATCTG GCAGGACGCC
ACCGAAGAGG TCGGTAAGGC CCTGGAGGAG CACTACCCGG CGGACAACCC GATCATCACG
ATCGTGAAGT CGGGCGCCAC GGGTAACTTC ACGCAGACCA GAACGCTGGC CGGCATGAAG
GGTCTGGTGA CCAACCCGAA GGGTGAGTTC ATCCCGCGGC CGATCAAGTC CTCGTTCCGC
GAGGGCCTGA CGGTGCTGGA GTACTTCATC AACACCCACG GCGCCCGTAA GGGTCTGGCG
GACACGGCAC TTCGTACCGC CGACTCGGGT TACCTGACCC GTCGTCTGGT CGACGTTTCG
CAGGACGTGA TCGTCCGCGA GCACGACTGC GAGACCGAGC GTGGCATCAA CGTCACGCTG
GCCGAGCGTC AGCCCGACGG CAGCCTGATC CGCGATCCGC ACGTCGAGAC CTCGGCGTTC
GCCCGCACCC TGGCCACCGA CGCGGTCGAC GCCGACGGCA ACGTCGTCAT CGAGCGTGGA
CACGACCTGG GCGACCCGGC CATCGACAAG CTGCTGGCGG CCGGCATCGA CCACGTCAAG
GTGCGTTCGG TGCTGACCTG TGCGTCGGCC ACCGGCGTGT GCGCCATGTG CTACGGCCGT
TCGATGGCGA CCGGCAAGCT GGTCGACATC GGCGAGGCCG TCGGCATCGT GGCCGCGCAG
TCCATCGGTG AGCCCGGCAC GCAGCTGACC ATGCGCACCT TCCACCAGGG CGGTGTGGGT
GAGGACATCA CCGGCGGTCT GCCCCGCGTG CAGGAGCTCT TCGAGGCCCG CGTGCCGCGG
AACAAGGCGC CGATCGCCGA CGTCTCCGGC CGTGTGCAGC TCGAGGAGGG TGAGCGCTTC
TACAAGATCA CCATCGTCCC GGACGACGGT GGCGAGGAAG TGGTCTACGA CAAGCTCTCC
AAGCGTCAGC GCCTGCGTGT GATCAAGCAC GAGGACGGCT CCGAGGGCGT GCTCTCCGAC
GGCGACCACG TCGAGGTCGG CGACCAGCTC ATGGAGGGTT CGGCCGATCC GCACGAGGTC
CTGCGTGTGC AGGGTCCGCG TGAGGTGCAG ATCCACCTGG TCCACGAGGT CCAGGAGGTC
TACCGGGCCC AGGGCGTGTC GATCCACGAC AAGCACATCG AGGTCATCGT CCGGCAGATG
CTGCGTCGCG TCACGATCAT CGATTCGGGT GCGACGGAGT TCCTGCCCGG CTCGCTGACC
GAGCGTGCGG AGTTCGAGTC GGAGAACCGT CGCGTCGTCG CGGAAGGTGG CGAGCCCGCC
GCCGGCCGTC CGGTGCTGAT GGGTATCACG AAGGCATCGC TGGCCACCGA TTCGTGGCTG
TCGGCGGCGT CGTTCCAGGA GACCACTCGC GTGCTGACCG ATGCGGCGAT CAACTGCCGC
AGCGACAAGC TGCAGGGTCT GAAGGAGAAC GTGATCATCG GCAAGCTGAT CCCGGCCGGT
ACCGGTATCA ACCGCTACCG CAACATCCAG GTGCAGCCGA CCGAAGAGGC CCGCGCTGCG
GCGTACACGA TCCCGTCCTA CGAGGATCAG TACTACAGCC CGGACTTCGG CCAGGCGACC
GGCGCTGCGG TGCCGCTGGA CGATTACGGG TACAGCGACT ACCGCTAG
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| Protein sequence | MLDVNFFDEL RIGLATADDI RQWSYGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVITDVN DEMRHNELST LEAEMVVEKK AVEDQRDADL EARAQKLEAD
LAELEAEGAK SDVRRKVRDG GEREMRQLRD RAQRELDRLD EIWTTFTKLA PKQLIVDEVL
YRELVDRYGE YFTGAMGAES IKKLIENFDI EAEAENLRET IRSGKGQKKL RALKRLKVVA
AFQTNRNSPM GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR
PQVWDVLEEV IAEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GKPLAMPRLD MVTGLYFLTT MIEGDKGEYR
PAATDQPEEG VYSSPAEAIM AMDRGALSVR AKIKVRLTQL RPPAALEAEL FENGWKPGLA
WTAETTLGRV MFNELLPISY PFINEQMHKK VQARIINDLA ERFPMIVVAQ TVDKLKDAGF
HWATRSGVTV SMADVLVPPQ KQEILDRYEA EADGIERKYQ RGALNHKERN DSLVKIWQDA
TEEVGKALEE HYPADNPIIT IVKSGATGNF TQTRTLAGMK GLVTNPKGEF IPRPIKSSFR
EGLTVLEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVREHDC ETERGINVTL
AERQPDGSLI RDPHVETSAF ARTLATDAVD ADGNVVIERG HDLGDPAIDK LLAAGIDHVK
VRSVLTCASA TGVCAMCYGR SMATGKLVDI GEAVGIVAAQ SIGEPGTQLT MRTFHQGGVG
EDITGGLPRV QELFEARVPR NKAPIADVSG RVQLEEGERF YKITIVPDDG GEEVVYDKLS
KRQRLRVIKH EDGSEGVLSD GDHVEVGDQL MEGSADPHEV LRVQGPREVQ IHLVHEVQEV
YRAQGVSIHD KHIEVIVRQM LRRVTIIDSG ATEFLPGSLT ERAEFESENR RVVAEGGEPA
AGRPVLMGIT KASLATDSWL SAASFQETTR VLTDAAINCR SDKLQGLKEN VIIGKLIPAG
TGINRYRNIQ VQPTEEARAA AYTIPSYEDQ YYSPDFGQAT GAAVPLDDYG YSDYR
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